RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 KCNJ2P63252 427 aa10.87□□□□□ -0.67
SMAD3-206ENST00000558739 ACVR1Q04771 509 aa10.87□□□□□ -0.67
SMAD3-206ENST00000558739 FAM27E3Q08E93 113 aa10.87□□□□□ -0.67
SMAD3-206ENST00000558739 TERF2Q15554 542 aa10.87□□□□□ -0.67
SMAD3-206ENST00000558739 DARS2Q6PI48 645 aaKnown RBP10.87□□□□□ -0.67
SMAD3-206ENST00000558739 MBOAT1Q6ZNC8 495 aa10.87□□□□□ -0.67
SMAD3-206ENST00000558739 PLEKHM3Q6ZWE6 761 aa10.87□□□□□ -0.67
SMAD3-206ENST00000558739 ZNF550Q7Z398 422 aa10.87□□□□□ -0.67
SMAD3-206ENST00000558739 CDKL3Q8IVW4 592 aaPredicted RBP10.87□□□□□ -0.67
SMAD3-206ENST00000558739 REXO1L1PQ8IX06 675 aa10.87□□□□□ -0.67
SMAD3-206ENST00000558739 LIX1Q8N485 282 aa10.87□□□□□ -0.67
SMAD3-206ENST00000558739 KRT35Q92764 455 aa10.87□□□□□ -0.67
SMAD3-206ENST00000558739 ZC3HAV1LQ96H79 300 aaKnown RBP10.87□□□□□ -0.67
SMAD3-206ENST00000558739 JSRP1Q96MG2 331 aaPredicted RBP10.87□□□□□ -0.67
SMAD3-206ENST00000558739 TTC1Q99614 292 aa10.87□□□□□ -0.67
SMAD3-206ENST00000558739 CCDC77Q9BR77 488 aa10.87□□□□□ -0.67
SMAD3-206ENST00000558739 ACKR4Q9NPB9 350 aa10.87□□□□□ -0.67
SMAD3-206ENST00000558739 PLCE1Q9P212 2302 aa10.86□□□□□ -0.67
SMAD3-206ENST00000558739 CD8B2A6NJW9 211 aa10.86□□□□□ -0.67
SMAD3-206ENST00000558739 PSTPIP1O43586 416 aa10.86□□□□□ -0.67
SMAD3-206ENST00000558739 CATP04040 527 aaKnown RBP10.86□□□□□ -0.67
SMAD3-206ENST00000558739 SERPIND1P05546 499 aa10.86□□□□□ -0.67
SMAD3-206ENST00000558739 GDF10P55107 478 aa10.86□□□□□ -0.67
SMAD3-206ENST00000558739 PRAMEP78395 509 aa10.86□□□□□ -0.67
SMAD3-206ENST00000558739 NR1I3Q14994 352 aa10.86□□□□□ -0.67
SMAD3-206ENST00000558739 CLNKQ7Z7G1 428 aa10.86□□□□□ -0.67
SMAD3-206ENST00000558739 SCUBE1Q8IWY4 988 aa10.86□□□□□ -0.67
SMAD3-206ENST00000558739 RASGEF1CQ8N431 466 aa10.86□□□□□ -0.67
SMAD3-206ENST00000558739 ARIH2OSQ8N7S6 290 aa10.86□□□□□ -0.67
SMAD3-206ENST00000558739 ZNF441Q8N8Z8 693 aa10.86□□□□□ -0.67
SMAD3-206ENST00000558739 MFSD9Q8NBP5 474 aa10.86□□□□□ -0.67
SMAD3-206ENST00000558739 GIMAP7Q8NHV1 300 aa10.86□□□□□ -0.67
SMAD3-206ENST00000558739 SLC22A8Q8TCC7 542 aa10.86□□□□□ -0.67
SMAD3-206ENST00000558739 TMEM171Q8WVE6 324 aa10.86□□□□□ -0.67
SMAD3-206ENST00000558739 INTS12Q96CB8 462 aaKnown RBP10.86□□□□□ -0.67
SMAD3-206ENST00000558739 FERMT1Q9BQL6 677 aa10.86□□□□□ -0.67
SMAD3-206ENST00000558739 AICDAQ9GZX7 198 aa10.86□□□□□ -0.67
SMAD3-206ENST00000558739 SPNS1Q9H2V7 528 aa10.86□□□□□ -0.67
SMAD3-206ENST00000558739 LRTM1Q9HBL6 345 aa10.86□□□□□ -0.67
SMAD3-206ENST00000558739 ZFP64Q9NPA5 681 aa10.86□□□□□ -0.67
SMAD3-206ENST00000558739 FAM114A2Q9NRY5 505 aa10.86□□□□□ -0.67
SMAD3-206ENST00000558739 CDC42EP3Q9UKI2 254 aa10.86□□□□□ -0.67
SMAD3-206ENST00000558739 WNK1Q9H4A3 2382 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 CD3EAPO15446 510 aaKnown RBP10.85□□□□□ -0.67
SMAD3-206ENST00000558739 STK10O94804 968 aaKnown RBP10.85□□□□□ -0.67
SMAD3-206ENST00000558739 PLAUP00749 431 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 RNH1P13489 461 aaKnown RBP10.85□□□□□ -0.67
SMAD3-206ENST00000558739 RPS3P23396 243 aaKnown RBP eCLIP10.85□□□□□ -0.67
SMAD3-206ENST00000558739 GDF1P27539 372 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 ATP5DP30049 168 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 FMO4P31512 558 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 ACVR1BP36896 505 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 HSD17B2P37059 387 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 MC3RP41968 323 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 TTPAP49638 278 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 CUL1Q13616 776 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 RPS6KA1Q15418 735 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 SLC18A3Q16572 532 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 AARS2Q5JTZ9 985 aaKnown RBP10.85□□□□□ -0.67
SMAD3-206ENST00000558739 CCDC181Q5TID7 509 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 HSDL2Q6YN16 418 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 IL17RELQ6ZVW7 336 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 KATNAL2Q8IYT4 538 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 CA13Q8N1Q1 262 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 FAM71DQ8N9W8 422 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 UTP15Q8TED0 518 aaKnown RBP10.85□□□□□ -0.67
SMAD3-206ENST00000558739 THAP11Q96EK4 314 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 WDYHV1Q96HA8 205 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 SGCZQ96LD1 299 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 MED18Q9BUE0 208 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 SFXN3Q9BWM7 321 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 KLHL31Q9H511 634 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 CXorf56Q9H5V9 222 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 CCDC177Q9NQR7 707 aaPredicted RBP10.85□□□□□ -0.67
SMAD3-206ENST00000558739 NDRG3Q9UGV2 375 aa10.85□□□□□ -0.67
SMAD3-206ENST00000558739 ZNF839A8K0R7 811 aa10.84□□□□□ -0.67
SMAD3-206ENST00000558739 A8MXE2 369 aa10.84□□□□□ -0.67
SMAD3-206ENST00000558739 GOLGA8KD6RF30 607 aa10.84□□□□□ -0.67
SMAD3-206ENST00000558739 GOLGA8TH3BQL2 631 aa10.84□□□□□ -0.67
SMAD3-206ENST00000558739 PSMD12O00232 456 aaPredicted RBP10.84□□□□□ -0.67
SMAD3-206ENST00000558739 KPNA5O15131 536 aa10.84□□□□□ -0.67
SMAD3-206ENST00000558739 PJA2O43164 708 aa10.84□□□□□ -0.67
SMAD3-206ENST00000558739 ADAM11O75078 769 aa10.84□□□□□ -0.67
SMAD3-206ENST00000558739 GYPCP04921 128 aa10.84□□□□□ -0.67
SMAD3-206ENST00000558739 CFPP27918 469 aa10.84□□□□□ -0.67
SMAD3-206ENST00000558739 RNF4P78317 190 aa10.84□□□□□ -0.67
SMAD3-206ENST00000558739 ASPHQ12797 758 aa10.84□□□□□ -0.67
SMAD3-206ENST00000558739 ASTE1Q2TB18 679 aaPredicted RBP10.84□□□□□ -0.67
SMAD3-206ENST00000558739 BICRALQ6AI39 1079 aa10.84□□□□□ -0.67
SMAD3-206ENST00000558739 VASNQ6EMK4 673 aa10.84□□□□□ -0.67
SMAD3-206ENST00000558739 AADACL2Q6P093 401 aa10.84□□□□□ -0.67
SMAD3-206ENST00000558739 LYPD8Q6UX82 237 aa10.84□□□□□ -0.67
SMAD3-206ENST00000558739 FAM47BQ8NA70 645 aa10.84□□□□□ -0.67
SMAD3-206ENST00000558739 OR10G3Q8NGC4 313 aa10.84□□□□□ -0.67
SMAD3-206ENST00000558739 LPGAT1Q92604 370 aa10.84□□□□□ -0.67
SMAD3-206ENST00000558739 BEX2Q9BXY8 128 aa10.84□□□□□ -0.67
SMAD3-206ENST00000558739 UGT2B28Q9BY64 529 aa10.84□□□□□ -0.67
SMAD3-206ENST00000558739 OR8D2Q9GZM6 311 aa10.84□□□□□ -0.67
SMAD3-206ENST00000558739 BOKQ9UMX3 212 aaPredicted RBP10.84□□□□□ -0.67
SMAD3-206ENST00000558739 DTX4Q9Y2E6 619 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms