RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 TFB2MQ9H5Q4 396 aaKnown RBP13.47□□□□□ -0.25
SPG11-210ENST00000558319 CNTN3Q9P232 1028 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 PCDHGA8Q9Y5G5 932 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 A0A0D9SEW6 157 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 SOX1O00570 391 aaPredicted RBP13.46□□□□□ -0.25
SPG11-210ENST00000558319 MSR1P21757 451 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 CFL1P23528 166 aaKnown RBP13.46□□□□□ -0.25
SPG11-210ENST00000558319 TMEM151BQ8IW70 566 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 TSACCQ96A04 125 aaPredicted RBP13.46□□□□□ -0.25
SPG11-210ENST00000558319 FAM163AQ96GL9 167 aaPredicted RBP13.46□□□□□ -0.25
SPG11-210ENST00000558319 MAGEH1Q9H213 219 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 MMP27Q9H306 513 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 COL1A2P08123 1366 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 RBM47A0AV96 593 aaKnown RBP13.46□□□□□ -0.25
SPG11-210ENST00000558319 HMX3A6NHT5 357 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 EEF1E1-BLOC1S5C9J1V9 151 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 AGTR2P50052 363 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 RPL26P61254 145 aaKnown RBP13.46□□□□□ -0.25
SPG11-210ENST00000558319 ASRGL1Q7L266 308 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 THOC6Q86W42 341 aaKnown RBP13.46□□□□□ -0.25
SPG11-210ENST00000558319 RADILQ96JH8 1075 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 ZNF701Q9NV72 531 aaPredicted RBP13.46□□□□□ -0.25
SPG11-210ENST00000558319 CXXC1Q9P0U4 656 aaPredicted RBP13.46□□□□□ -0.25
SPG11-210ENST00000558319 SLIT1O75093 1534 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 SLC16A5O15375 505 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 CELP19835 753 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 PTPN6P29350 595 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 CDNFQ49AH0 187 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 PIGGQ5H8A4 983 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 RBM12BQ8IXT5 1001 aaKnown RBP13.46□□□□□ -0.25
SPG11-210ENST00000558319 TRMT10AQ8TBZ6 339 aaKnown RBP13.46□□□□□ -0.25
SPG11-210ENST00000558319 MAFBQ9Y5Q3 323 aaPredicted RBP13.46□□□□□ -0.25
SPG11-210ENST00000558319 A0A0U1RQK1 487 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 LOC730098B7Z3J9 87 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 KLF8O95600 359 aaPredicted RBP13.46□□□□□ -0.25
SPG11-210ENST00000558319 WDPCPO95876 746 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 CDK6Q00534 326 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 MOGSQ13724 837 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 FKBP1CQ5VVH2 108 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 SFRP4Q6FHJ7 346 aaPredicted RBP13.46□□□□□ -0.25
SPG11-210ENST00000558319 ANKRD54Q6NXT1 300 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 USP53Q70EK8 1073 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 NPLOC4Q8TAT6 608 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 SORCS1Q8WY21 1168 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 ZNF516Q92618 1163 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 MAPKAP1Q9BPZ7 522 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 C11orf84Q9BUA3 381 aaPredicted RBP13.46□□□□□ -0.25
SPG11-210ENST00000558319 YIPF1Q9Y548 306 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 AP1M2Q9Y6Q5 423 aa13.46□□□□□ -0.25
SPG11-210ENST00000558319 FLRT2O43155 660 aa13.46□□□□□ -0.26
SPG11-210ENST00000558319 C6orf47O95873 294 aa13.46□□□□□ -0.26
SPG11-210ENST00000558319 MFSD13AQ14CX5 517 aa13.46□□□□□ -0.26
SPG11-210ENST00000558319 TMEM69Q5SWH9 247 aa13.46□□□□□ -0.26
SPG11-210ENST00000558319 ANKRD13BQ86YJ7 626 aa13.46□□□□□ -0.26
SPG11-210ENST00000558319 ZFP41Q8N8Y5 198 aa13.46□□□□□ -0.26
SPG11-210ENST00000558319 OR6N1Q8NGY5 312 aa13.46□□□□□ -0.26
SPG11-210ENST00000558319 C16orf58Q96GQ5 468 aa13.46□□□□□ -0.26
SPG11-210ENST00000558319 F8W036 122 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 RFPL2O75678 378 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 POP7O75817 140 aaKnown RBP13.45□□□□□ -0.26
SPG11-210ENST00000558319 LATS1O95835 1130 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 ESR1P03372 595 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 NUDT7P0C024 238 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 IL1R2P27930 398 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 NDST2P52849 883 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 BLOC1S1P78537 153 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 IL10RBQ08334 325 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 BEST3Q8N1M1 668 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 RPLP0P6Q8NHW5 317 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 CAMK1GQ96NX5 476 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 STRA6Q9BX79 667 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 SPATA6Q9NWH7 488 aaPredicted RBP13.45□□□□□ -0.26
SPG11-210ENST00000558319 IFT52Q9Y366 437 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 VWDEQ8N2E2 1590 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 KIAA0513O60268 411 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 BCAS2O75934 225 aaPredicted RBP13.45□□□□□ -0.26
SPG11-210ENST00000558319 CHRNA1P02708 482 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 AKR1C4P17516 323 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 TM4SF1P30408 202 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 BMP8BP34820 402 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 RBMXP38159 391 aaKnown RBP13.45□□□□□ -0.26
SPG11-210ENST00000558319 BMP8AQ7Z5Y6 402 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 C4orf32Q8N8J7 132 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 OR4F6Q8NGB9 312 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 BTBD1Q9H0C5 482 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 PCDHGB6Q9Y5F9 930 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 BORCS7-ASMTA0A0B4J1R7 106 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 C2CD4BA6NLJ0 364 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 GOSR2O14653 212 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 SYN3O14994 580 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 DLX3O60479 287 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 ATP1B2P14415 290 aaPredicted RBP13.45□□□□□ -0.26
SPG11-210ENST00000558319 STK19P49842 368 aaPredicted RBP13.45□□□□□ -0.26
SPG11-210ENST00000558319 IFNL1Q8IU54 200 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 C15orf40Q8WUR7 153 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 UHRF1Q96T88 793 aaPredicted RBP13.45□□□□□ -0.26
SPG11-210ENST00000558319 MTG2Q9H4K7 406 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 BIN3Q9NQY0 253 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 SERINC1Q9NRX5 453 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 PCDH17O14917 1159 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms