RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 ZNF235Q14590 738 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 OASLQ15646 514 aaKnown RBP5.42□□□□□ -1.54
RTF1-204ENST00000558117 CXorf66Q5JRM2 361 aaPredicted RBP5.42□□□□□ -1.54
RTF1-204ENST00000558117 FAM171BQ6P995 826 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 CASC1Q6TDU7 716 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 GCNT7Q6ZNI0 430 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 GALNTL5Q7Z4T8 443 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 ABI3BPQ7Z7G0 1075 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 KCNMB4Q86W47 210 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 CATSPER3Q86XQ3 398 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 HPS6Q86YV9 775 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 MMAAQ8IVH4 418 aaKnown RBP5.42□□□□□ -1.54
RTF1-204ENST00000558117 CHERPQ8IWX8 916 aaKnown RBP5.42□□□□□ -1.54
RTF1-204ENST00000558117 SPATA22Q8NHS9 363 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 TBCKQ8TEA7 893 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 ART4Q93070 314 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 MMABQ96EY8 250 aaPredicted RBP5.42□□□□□ -1.54
RTF1-204ENST00000558117 ZNF385AQ96PM9 386 aaKnown RBP5.42□□□□□ -1.54
RTF1-204ENST00000558117 HSD17B14Q9BPX1 270 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 ITPAQ9BY32 194 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 DCTPP1Q9H773 170 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 ZNF556Q9HAH1 456 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 C17orf75Q9HAS0 396 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 KCNMB3Q9NPA1 279 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 ABCF3Q9NUQ8 709 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 AKAP7Q9P0M2 348 aaPredicted RBP5.42□□□□□ -1.54
RTF1-204ENST00000558117 ABI3Q9P2A4 366 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 CNOT8Q9UFF9 292 aaKnown RBP5.42□□□□□ -1.54
RTF1-204ENST00000558117 PLA2G4CQ9UP65 541 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 ERVK-11Q9UQG0 969 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 SNX8Q9Y5X2 465 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 RYR1P21817 5038 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 SPTY2D1-AS1A0A0U1RR47 76 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 IFITM10A6NMD0 228 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 AGAP14A8MT82 685 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 EIF3CLB5ME19 914 aaKnown RBP5.41□□□□□ -1.54
RTF1-204ENST00000558117 E7EWF7 191 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 SLC31A1O15431 190 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 HCRTO43612 131 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 PAGE4O60829 102 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 RNASEH1O60930 286 aaKnown RBP5.41□□□□□ -1.54
RTF1-204ENST00000558117 CRLF1O75462 422 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 CEACAM4O75871 244 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 BAG2O95816 211 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 ZDHHC11BP0C7U3 371 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 NR2F1P10589 423 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 SRCP12931 536 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 PRLRP16471 622 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 TAF6P49848 677 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 CSNK1G2P78368 415 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 PPP2R2BQ00005 443 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 RASA2Q15283 850 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 CHRNA6Q15825 494 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 ATP13A5Q4VNC0 1218 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 METTL2BQ6P1Q9 378 aaKnown RBP5.41□□□□□ -1.54
RTF1-204ENST00000558117 MOXD1Q6UVY6 613 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 Q6ZSR6 202 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 ADIPOR2Q86V24 386 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 PDCL2Q8N4E4 241 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 ARL10Q8N8L6 244 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 NCOA7Q8NI08 942 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 TANKQ92844 425 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 METTL2AQ96IZ6 378 aaKnown RBP5.41□□□□□ -1.54
RTF1-204ENST00000558117 WDFY2Q96P53 400 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 STRA6Q9BX79 667 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 SLC2A11Q9BYW1 496 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 PLA2G12AQ9BZM1 189 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 TCEAL2Q9H3H9 227 aaPredicted RBP5.41□□□□□ -1.54
RTF1-204ENST00000558117 DDX43Q9NXZ2 648 aaKnown RBP5.41□□□□□ -1.54
RTF1-204ENST00000558117 SMARCAL1Q9NZC9 954 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 C1RLQ9NZP8 487 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 CHORDC1Q9UHD1 332 aaPredicted RBP5.41□□□□□ -1.54
RTF1-204ENST00000558117 RPS6KA6Q9UK32 745 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 KCNS2Q9ULS6 477 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 PCDHGB4Q9UN71 923 aa5.41□□□□□ -1.54
RTF1-204ENST00000558117 SCN1AP35498 2009 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 MAGEA13PA6NCF6 341 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 TRIM64A6NGJ6 449 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 TRIM64BA6NI03 449 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 CCDC69A6NI79 296 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 F8VP50 259 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 VCYO14598 125 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 AP3D1O14617 1153 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 BUB3O43684 328 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 ERAL1O75616 437 aaKnown RBP5.4□□□□□ -1.54
RTF1-204ENST00000558117 CLEC3BP05452 202 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 CLTAP09496 248 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 GNA11P29992 359 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 HLA-FP30511 346 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 PGFP49763 221 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 CCL11P51671 97 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 METAP1P53582 386 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 CHAF1BQ13112 559 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 OLIG2Q13516 323 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 C1orf61Q13536 156 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 HNRNPA1L2Q32P51 320 aaKnown RBP5.4□□□□□ -1.54
RTF1-204ENST00000558117 C6orf141Q5SZD1 244 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 TPRG1LQ5T0D9 272 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 C9orf64Q5T6V5 341 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 GGNBP1Q5YKI7 109 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms