RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ANKRD13BQ86YJ7 626 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 AQP11Q8NBQ7 271 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 KIAA0895Q8NCT3 520 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 THEM6Q8WUY1 208 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 KCTD13Q8WZ19 329 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 SMPDL3AQ92484 453 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 PYURFQ96I23 114 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 FBXL3Q9UKT7 428 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 FAM212BQ9NTI7 297 aaPredicted RBP8.54□□□□□ -1.04
SYNE3-205ENST00000557275 VNN3Q9NY84 501 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 ACTR10Q9NZ32 417 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 VPS29Q9UBQ0 182 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 SPATA31E1Q6ZUB1 1445 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 MTMR11A4FU01 709 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 GABRDO14764 452 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 NPC1O15118 1278 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 CYP2B6P20813 491 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 TSFMP43897 325 aaKnown RBP8.54□□□□□ -1.04
SYNE3-205ENST00000557275 SORCS1Q8WY21 1168 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 CMTM7Q96FZ5 175 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 ABCG5Q9H222 651 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 CNOT11Q9UKZ1 510 aaKnown RBP8.54□□□□□ -1.04
SYNE3-205ENST00000557275 SOBPA7XYQ1 873 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 F8VP50 259 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 SCAPQ12770 1279 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 RIN1Q13671 783 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 TMEM119Q4V9L6 283 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 TMEM214Q6NUQ4 689 aaKnown RBP8.54□□□□□ -1.04
SYNE3-205ENST00000557275 ZNF366Q8N895 744 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 ISCA1Q9BUE6 129 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 INSRRP14616 1297 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 KITLGP21583 273 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 PRKAR1BP31321 381 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 PYROXD2Q8N2H3 581 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 OR56B4Q8NH76 319 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 NCDNQ9UBB6 729 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 FAM183BPQ6ZVS7 135 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 CEP68Q76N32 757 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 PAPD5Q8NDF8 572 aaKnown RBP8.54□□□□□ -1.04
SYNE3-205ENST00000557275 LFNGQ8NES3 379 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 OR7G1Q8NGA0 311 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 SPPL2BQ8TCT7 592 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 KLRF1Q9NZS2 232 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 LACTBL1A8MY62 500 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 MPPED1O15442 326 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 PRKACBP22694 351 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 NKX3-2P78367 333 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 TSTQ16762 297 aaKnown RBP8.54□□□□□ -1.04
SYNE3-205ENST00000557275 FAM43BQ6ZT52 329 aaPredicted RBP8.54□□□□□ -1.04
SYNE3-205ENST00000557275 RASGEF1CQ8N431 466 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 TSEN2Q8NCE0 465 aaKnown RBP8.54□□□□□ -1.04
SYNE3-205ENST00000557275 UBXN10Q96LJ8 280 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 OSMRQ99650 979 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 IL12RB2Q99665 862 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 FUCA2Q9BTY2 467 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 OR2AG1Q9H205 316 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 PCDHGA6Q9Y5G7 932 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 NUBP2Q9Y5Y2 271 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 MANSC4A6NHS7 340 aaPredicted RBP8.54□□□□□ -1.04
SYNE3-205ENST00000557275 FAM189A1O60320 539 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 DFFBO76075 338 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 DYRK1AQ13627 763 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 RNASE10Q5GAN6 216 aaKnown RBP8.54□□□□□ -1.04
SYNE3-205ENST00000557275 SLC35F1Q5T1Q4 408 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 UNC5DQ6UXZ4 953 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 CHST9Q7L1S5 443 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 PDSS2Q86YH6 399 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 NKD2Q969F2 451 aaPredicted RBP8.54□□□□□ -1.04
SYNE3-205ENST00000557275 ATG5Q9H1Y0 275 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 SEC61A2Q9H9S3 476 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 ACOT13Q9NPJ3 140 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 PAQR5Q9NXK6 330 aaPredicted RBP8.54□□□□□ -1.04
SYNE3-205ENST00000557275 ASTN1O14525 1302 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 MIA3Q5JRA6 1907 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 PEX12O00623 359 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 IMPDH1P20839 514 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 ICAM3P32942 547 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 ARL16Q0P5N6 197 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 ZC3H12AQ5D1E8 599 aaKnown RBP8.54□□□□□ -1.04
SYNE3-205ENST00000557275 ZNF425Q6IV72 752 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 OR4K17Q8NGC6 315 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 SMAP2Q8WU79 429 aaPredicted RBP8.54□□□□□ -1.04
SYNE3-205ENST00000557275 LENG8Q96PV6 779 aaPredicted RBP8.54□□□□□ -1.04
SYNE3-205ENST00000557275 FDXACB1Q9BRP7 624 aaPredicted RBP8.54□□□□□ -1.04
SYNE3-205ENST00000557275 CENPMQ9NSP4 180 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 GJD2Q9UKL4 321 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 PRKAB1Q9Y478 270 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 TOR1BO14657 336 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 CDK14O94921 469 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 IL33O95760 270 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 PER3P56645 1201 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 GALK2Q01415 458 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 TMEM35AQ53FP2 167 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 AGAP7PQ5VUJ5 663 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 UHRF2Q96PU4 802 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 PRDM12Q9H4Q4 367 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 SMPD4Q9NXE4 827 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 C17orf112F2Z3M2 114 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 NFKBIEO00221 500 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 TP53I11O14683 189 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms