RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 ANKRD37Q7Z713 158 aa23.12■■□□□ 1.29
SDR39U1-221ENST00000556707 GALNT16Q8N428 558 aa23.12■■□□□ 1.29
SDR39U1-221ENST00000556707 METTL6Q8TCB7 284 aa23.12■■□□□ 1.29
SDR39U1-221ENST00000556707 TSLPQ969D9 159 aa23.12■■□□□ 1.29
SDR39U1-221ENST00000556707 SLC25A23Q9BV35 468 aa23.12■■□□□ 1.29
SDR39U1-221ENST00000556707 GATA5Q9BWX5 397 aaPredicted RBP23.12■■□□□ 1.29
SDR39U1-221ENST00000556707 ZNF717Q9BY31 904 aaPredicted RBP23.12■■□□□ 1.29
SDR39U1-221ENST00000556707 ZNF700Q9H0M5 742 aa23.12■■□□□ 1.29
SDR39U1-221ENST00000556707 SLC25A18Q9H1K4 315 aa23.12■■□□□ 1.29
SDR39U1-221ENST00000556707 MID1IP1Q9NPA3 183 aa23.12■■□□□ 1.29
SDR39U1-221ENST00000556707 ACTL7BQ9Y614 415 aa23.12■■□□□ 1.29
SDR39U1-221ENST00000556707 NSG1A0A0A6YYJ2 146 aa23.11■■□□□ 1.29
SDR39U1-221ENST00000556707 A6NL46 340 aa23.11■■□□□ 1.29
SDR39U1-221ENST00000556707 H3BQF6 201 aa23.11■■□□□ 1.29
SDR39U1-221ENST00000556707 CYR61O00622 381 aa23.11■■□□□ 1.29
SDR39U1-221ENST00000556707 UBFD1O14562 309 aaKnown RBP23.11■■□□□ 1.29
SDR39U1-221ENST00000556707 MYZAPP0CAP1 466 aa23.11■■□□□ 1.29
SDR39U1-221ENST00000556707 HMOX2P30519 316 aa23.11■■□□□ 1.29
SDR39U1-221ENST00000556707 BTG2P78543 158 aa23.11■■□□□ 1.29
SDR39U1-221ENST00000556707 PCOLCEQ15113 449 aa23.11■■□□□ 1.29
SDR39U1-221ENST00000556707 FAM219BQ5XKK7 198 aa23.11■■□□□ 1.29
SDR39U1-221ENST00000556707 TCTN3Q6NUS6 607 aa23.11■■□□□ 1.29
SDR39U1-221ENST00000556707 ZCCHC7Q8N3Z6 543 aaKnown RBP23.11■■□□□ 1.29
SDR39U1-221ENST00000556707 FDCSPQ8NFU4 85 aa23.11■■□□□ 1.29
SDR39U1-221ENST00000556707 PTCHD1Q96NR3 888 aa23.11■■□□□ 1.29
SDR39U1-221ENST00000556707 BRF2Q9HAW0 419 aa23.11■■□□□ 1.29
SDR39U1-221ENST00000556707 ZNF160Q9HCG1 818 aa23.11■■□□□ 1.29
SDR39U1-221ENST00000556707 MLXIPLQ9NP71 852 aa23.11■■□□□ 1.29
SDR39U1-221ENST00000556707 PRDM9Q9NQV7 894 aa23.11■■□□□ 1.29
SDR39U1-221ENST00000556707 RIC8BQ9NVN3 520 aa23.11■■□□□ 1.29
SDR39U1-221ENST00000556707 G3BP2Q9UN86 482 aaKnown RBP23.11■■□□□ 1.29
SDR39U1-221ENST00000556707 MRPS33Q9Y291 106 aaKnown RBP23.11■■□□□ 1.29
SDR39U1-221ENST00000556707 MMACHCQ9Y4U1 282 aa23.11■■□□□ 1.29
SDR39U1-221ENST00000556707 SMG1Q96Q15 3661 aaKnown RBP23.1■■□□□ 1.29
SDR39U1-221ENST00000556707 BSGP35613 385 aa23.1■■□□□ 1.29
SDR39U1-221ENST00000556707 ETV4P43268 484 aa23.1■■□□□ 1.29
SDR39U1-221ENST00000556707 SLAMF1Q13291 335 aa23.1■■□□□ 1.29
SDR39U1-221ENST00000556707 CASP8Q14790 479 aa23.1■■□□□ 1.29
SDR39U1-221ENST00000556707 TCHHL1Q5QJ38 904 aaPredicted RBP23.1■■□□□ 1.29
SDR39U1-221ENST00000556707 MAPKAP1Q9BPZ7 522 aa23.1■■□□□ 1.29
SDR39U1-221ENST00000556707 MECRQ9BV79 373 aa23.1■■□□□ 1.29
SDR39U1-221ENST00000556707 STMN4Q9H169 189 aaPredicted RBP23.1■■□□□ 1.29
SDR39U1-221ENST00000556707 DDX31Q9H8H2 851 aaKnown RBP23.1■■□□□ 1.29
SDR39U1-221ENST00000556707 GPR83Q9NYM4 423 aa23.1■■□□□ 1.29
SDR39U1-221ENST00000556707 CROCCQ5TZA2 2017 aa23.09■■□□□ 1.29
SDR39U1-221ENST00000556707 EIF4E1BA6NMX2 242 aaKnown RBP23.09■■□□□ 1.29
SDR39U1-221ENST00000556707 CLDN4O14493 209 aa23.09■■□□□ 1.29
SDR39U1-221ENST00000556707 ULK1O75385 1050 aa23.09■■□□□ 1.29
SDR39U1-221ENST00000556707 HSD3B1P14060 373 aa23.09■■□□□ 1.29
SDR39U1-221ENST00000556707 HSD3B2P26439 372 aa23.09■■□□□ 1.29
SDR39U1-221ENST00000556707 HNRNPFP52597 415 aaKnown RBP23.09■■□□□ 1.29
SDR39U1-221ENST00000556707 Q0VFX4 171 aa23.09■■□□□ 1.29
SDR39U1-221ENST00000556707 MYBPC3Q14896 1274 aa23.09■■□□□ 1.29
SDR39U1-221ENST00000556707 LACTB2Q53H82 288 aaPredicted RBP23.09■■□□□ 1.29
SDR39U1-221ENST00000556707 PARP9Q8IXQ6 854 aa23.09■■□□□ 1.29
SDR39U1-221ENST00000556707 ZNF595Q8IYB9 648 aa23.09■■□□□ 1.29
SDR39U1-221ENST00000556707 FAM47BQ8NA70 645 aa23.09■■□□□ 1.29
SDR39U1-221ENST00000556707 TMEM52Q8NDY8 209 aa23.09■■□□□ 1.29
SDR39U1-221ENST00000556707 CNDP1Q96KN2 507 aa23.09■■□□□ 1.29
SDR39U1-221ENST00000556707 CSF3RQ99062 836 aa23.09■■□□□ 1.29
SDR39U1-221ENST00000556707 TRMOQ9BU70 441 aa23.09■■□□□ 1.29
SDR39U1-221ENST00000556707 TUBB6Q9BUF5 446 aa23.09■■□□□ 1.29
SDR39U1-221ENST00000556707 PRTFDC1Q9NRG1 225 aa23.09■■□□□ 1.29
SDR39U1-221ENST00000556707 AHSPQ9NZD4 102 aa23.09■■□□□ 1.29
SDR39U1-221ENST00000556707 SLC12A4Q9UP95 1085 aa23.09■■□□□ 1.29
SDR39U1-221ENST00000556707 TP53TG5Q9Y2B4 290 aa23.09■■□□□ 1.29
SDR39U1-221ENST00000556707 SPACA6W5XKT8 324 aa23.09■■□□□ 1.29
SDR39U1-221ENST00000556707 IGKV3D-11A0A0A0MRZ8 115 aa23.08■■□□□ 1.29
SDR39U1-221ENST00000556707 A0A0A6YYD5 115 aa23.08■■□□□ 1.29
SDR39U1-221ENST00000556707 IGHV3-20A0A0C4DH32 117 aa23.08■■□□□ 1.29
SDR39U1-221ENST00000556707 EEDO75530 441 aaKnown RBP23.08■■□□□ 1.29
SDR39U1-221ENST00000556707 PRB1P04280 392 aa23.08■■□□□ 1.29
SDR39U1-221ENST00000556707 MAOAP21397 527 aa23.08■■□□□ 1.29
SDR39U1-221ENST00000556707 ITGA3P26006 1051 aa23.08■■□□□ 1.29
SDR39U1-221ENST00000556707 HSD17B7P56937 341 aa23.08■■□□□ 1.29
SDR39U1-221ENST00000556707 ZNF33BQ06732 778 aa23.08■■□□□ 1.29
SDR39U1-221ENST00000556707 SFT2D3Q587I9 215 aa23.08■■□□□ 1.29
SDR39U1-221ENST00000556707 SCUBE1Q8IWY4 988 aa23.08■■□□□ 1.29
SDR39U1-221ENST00000556707 IMMP1LQ96LU5 166 aa23.08■■□□□ 1.29
SDR39U1-221ENST00000556707 KCNA7Q96RP8 456 aa23.08■■□□□ 1.29
SDR39U1-221ENST00000556707 HBEGFQ99075 208 aa23.08■■□□□ 1.29
SDR39U1-221ENST00000556707 WDR77Q9BQA1 342 aaPredicted RBP23.08■■□□□ 1.29
SDR39U1-221ENST00000556707 NUDT9Q9BW91 350 aa23.08■■□□□ 1.29
SDR39U1-221ENST00000556707 MRPL1Q9BYD6 325 aaKnown RBP23.08■■□□□ 1.29
SDR39U1-221ENST00000556707 NECTIN3Q9NQS3 549 aa23.08■■□□□ 1.29
SDR39U1-221ENST00000556707 ZNF71Q9NQZ8 489 aaPredicted RBP23.08■■□□□ 1.29
SDR39U1-221ENST00000556707 NMRK1Q9NWW6 199 aa23.08■■□□□ 1.29
SDR39U1-221ENST00000556707 FBXW2Q9UKT8 454 aa23.08■■□□□ 1.29
SDR39U1-221ENST00000556707 TIMM22Q9Y584 194 aa23.08■■□□□ 1.29
SDR39U1-221ENST00000556707 TCRBV16S1A1N1A0A5B0 115 aa23.07■■□□□ 1.28
SDR39U1-221ENST00000556707 GOLGA6L10A6NI86 522 aa23.07■■□□□ 1.28
SDR39U1-221ENST00000556707 K7EM74 188 aa23.07■■□□□ 1.28
SDR39U1-221ENST00000556707 TM9SF1O15321 606 aa23.07■■□□□ 1.28
SDR39U1-221ENST00000556707 KLHL41O60662 606 aa23.07■■□□□ 1.28
SDR39U1-221ENST00000556707 SEC24DO94855 1032 aaPredicted RBP23.07■■□□□ 1.28
SDR39U1-221ENST00000556707 BPGMP07738 259 aa23.07■■□□□ 1.28
SDR39U1-221ENST00000556707 HTR6P50406 440 aa23.07■■□□□ 1.28
SDR39U1-221ENST00000556707 PGDP52209 483 aa23.07■■□□□ 1.28
SDR39U1-221ENST00000556707 OR4D2P58180 307 aa23.07■■□□□ 1.28
SDR39U1-221ENST00000556707 CSTF3Q12996 717 aaKnown RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms