RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 C16orf52Q8NHV5 167 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 FAM57AQ8TBR7 257 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 PHF10Q8WUB8 498 aaKnown RBP12.36□□□□□ -0.43
TGFB3-204ENST00000556285 VMP1Q96GC9 406 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 F2RL3Q96RI0 385 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 VKORC1Q9BQB6 163 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 NPLQ9BXD5 320 aaPredicted RBP12.36□□□□□ -0.43
TGFB3-204ENST00000556285 NT5DC2Q9H857 520 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 INTS1Q8N201 2190 aaKnown RBP12.35□□□□□ -0.43
TGFB3-204ENST00000556285 EFCAB8A8MWE9 144 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 G3V3Y1 287 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 KLRC4-KLRK1H3BQV0 150 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 FANCGO15287 622 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 B3GALT2O43825 422 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 CLEC3AO75596 197 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 OR6B1O95007 311 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 TPOP07202 933 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 CCDC166P0CW27 439 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 SSTR1P30872 391 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 KCNC1P48547 511 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 LIM2P55344 173 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 HSD17B7P56937 341 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 DOC2AQ14183 400 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 TERF2Q15554 542 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 ADPRMQ3LIE5 342 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 ABHD17CQ6PCB6 329 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 CEP128Q6ZU80 1094 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 UBE3DQ7Z6J8 389 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 SNX31Q8N9S9 440 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 ZFP62Q8NB50 900 aaPredicted RBP12.35□□□□□ -0.43
TGFB3-204ENST00000556285 POGLUT1Q8NBL1 392 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 OR2L5Q8NG80 312 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 KRT12Q99456 494 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 DERL2Q9GZP9 239 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 REXO4Q9GZR2 422 aaKnown RBP12.35□□□□□ -0.43
TGFB3-204ENST00000556285 DEFB127Q9H1M4 99 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 POPDC3Q9HBV1 291 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 PRDM7Q9NQW5 492 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 DNAJC11Q9NVH1 559 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 WWOXQ9NZC7 414 aa12.35□□□□□ -0.43
TGFB3-204ENST00000556285 DNAJC13O75165 2243 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 ANKDD1BA6NHY2 528 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 FAM166BA8MTA8 275 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 WWP2O00308 870 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 CLDN4O14493 209 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 ZNF354AO60765 605 aaPredicted RBP12.34□□□□□ -0.43
TGFB3-204ENST00000556285 SH3BGRLO75368 114 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 ZFAND5O76080 213 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 CD1DP15813 335 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 GGT5P36269 586 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 SOX3P41225 446 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 SSR4P51571 173 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 RIPPLY3P57055 190 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 GNG11P61952 73 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 ID2Q02363 134 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 ZNF750Q32MQ0 723 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 EMC4Q5J8M3 183 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 IL20RBQ6UXL0 311 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 MEX3BQ6ZN04 569 aaKnown RBP12.34□□□□□ -0.43
TGFB3-204ENST00000556285 ZNF793Q6ZN11 406 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 GPSM1Q86YR5 675 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 ZNF595Q8IYB9 648 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 KRT78Q8N1N4 520 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 PSD4Q8NDX1 1056 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 TTLQ8NG68 377 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 PTPMT1Q8WUK0 201 aaPredicted RBP12.34□□□□□ -0.43
TGFB3-204ENST00000556285 SERINC2Q96SA4 455 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 CCDC77Q9BR77 488 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 ENKD1Q9H0I2 346 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 DPH5Q9H2P9 285 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 ADAP2Q9NPF8 381 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 GPRC5BQ9NZH0 403 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 DAPP1Q9UN19 280 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 ERVK-11Q9UQG0 969 aa12.34□□□□□ -0.43
TGFB3-204ENST00000556285 YARS2Q9Y2Z4 477 aaKnown RBP12.34□□□□□ -0.43
TGFB3-204ENST00000556285 NKX2-6A6NCS4 301 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 RTCAO00442 366 aaKnown RBP12.33□□□□□ -0.44
TGFB3-204ENST00000556285 CLGNO14967 610 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 CTNSO60931 367 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 LDB3O75112 727 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 FAM155BO75949 473 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 C1QAP02745 245 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 IFNA16P05015 189 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 SSTR2P30874 369 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 HK2P52789 917 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 SLC12A2P55011 1212 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 MTTPP55157 894 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 POU4F1Q01851 419 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 CBLBQ13191 982 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 BMPR2Q13873 1038 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 ELAVL1Q15717 326 aaKnown RBP12.33□□□□□ -0.44
TGFB3-204ENST00000556285 TRIM40Q6P9F5 258 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 OR2M7Q8NG81 312 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 CA5BP1Q8WTZ4 195 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 PYROXD1Q8WU10 500 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 ASB15Q8WXK1 588 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 EXT2Q93063 718 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 WDR34Q96EX3 536 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 PTCD3Q96EY7 689 aaKnown RBP12.33□□□□□ -0.44
TGFB3-204ENST00000556285 RUNDC3BQ96NL0 473 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms