RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 LIM2P55344 173 aa17.51■□□□□ 0.39
CDKN3-209ENST00000556102 RCN2Q14257 317 aa17.51■□□□□ 0.39
CDKN3-209ENST00000556102 ELAVL1Q15717 326 aaKnown RBP17.51■□□□□ 0.39
CDKN3-209ENST00000556102 ABHD17CQ6PCB6 329 aa17.51■□□□□ 0.39
CDKN3-209ENST00000556102 GPALPP1Q8IXQ4 340 aa17.51■□□□□ 0.39
CDKN3-209ENST00000556102 ZBED8Q8IZ13 594 aa17.51■□□□□ 0.39
CDKN3-209ENST00000556102 ACBD4Q8NC06 268 aa17.51■□□□□ 0.39
CDKN3-209ENST00000556102 PSD4Q8NDX1 1056 aa17.51■□□□□ 0.39
CDKN3-209ENST00000556102 TSPAN17Q96FV3 270 aa17.51■□□□□ 0.39
CDKN3-209ENST00000556102 KCNF1Q9H3M0 494 aa17.51■□□□□ 0.39
CDKN3-209ENST00000556102 COPS7BQ9H9Q2 264 aaPredicted RBP17.51■□□□□ 0.39
CDKN3-209ENST00000556102 SMYD2Q9NRG4 433 aa17.51■□□□□ 0.39
CDKN3-209ENST00000556102 DAPP1Q9UN19 280 aa17.51■□□□□ 0.39
CDKN3-209ENST00000556102 ERVK-11Q9UQG0 969 aa17.51■□□□□ 0.39
CDKN3-209ENST00000556102 INTS1Q8N201 2190 aaKnown RBP17.5■□□□□ 0.39
CDKN3-209ENST00000556102 PHF3Q92576 2039 aaKnown RBP17.5■□□□□ 0.39
CDKN3-209ENST00000556102 EML6Q6ZMW3 1958 aa17.5■□□□□ 0.39
CDKN3-209ENST00000556102 CELSR1Q9NYQ6 3014 aa17.5■□□□□ 0.39
CDKN3-209ENST00000556102 TMEM200CA6NKL6 621 aa17.5■□□□□ 0.39
CDKN3-209ENST00000556102 A8MVJ9 347 aa17.5■□□□□ 0.39
CDKN3-209ENST00000556102 CYR61O00622 381 aa17.5■□□□□ 0.39
CDKN3-209ENST00000556102 RPL21P46778 160 aaKnown RBP17.5■□□□□ 0.39
CDKN3-209ENST00000556102 TGM3Q08188 693 aa17.5■□□□□ 0.39
CDKN3-209ENST00000556102 EFTUD2Q15029 972 aaKnown RBP eCLIP17.5■□□□□ 0.39
CDKN3-209ENST00000556102 CDKL4Q5MAI5 379 aa17.5■□□□□ 0.39
CDKN3-209ENST00000556102 TMEM211Q6ICI0 200 aa17.5■□□□□ 0.39
CDKN3-209ENST00000556102 SULT1C3Q6IMI6 304 aa17.5■□□□□ 0.39
CDKN3-209ENST00000556102 ARHGAP11AQ6P4F7 1023 aa17.5■□□□□ 0.39
CDKN3-209ENST00000556102 CLNKQ7Z7G1 428 aa17.5■□□□□ 0.39
CDKN3-209ENST00000556102 GPSM1Q86YR5 675 aa17.5■□□□□ 0.39
CDKN3-209ENST00000556102 CHTF18Q8WVB6 975 aa17.5■□□□□ 0.39
CDKN3-209ENST00000556102 ASB15Q8WXK1 588 aa17.5■□□□□ 0.39
CDKN3-209ENST00000556102 DAZLQ92904 295 aaKnown RBP17.5■□□□□ 0.39
CDKN3-209ENST00000556102 WDR34Q96EX3 536 aa17.5■□□□□ 0.39
CDKN3-209ENST00000556102 CSF3RQ99062 836 aa17.5■□□□□ 0.39
CDKN3-209ENST00000556102 CAB39LQ9H9S4 337 aa17.5■□□□□ 0.39
CDKN3-209ENST00000556102 HPF1Q9NWY4 346 aa17.5■□□□□ 0.39
CDKN3-209ENST00000556102 KCMF1Q9P0J7 381 aa17.5■□□□□ 0.39
CDKN3-209ENST00000556102 MTO1Q9Y2Z2 717 aaKnown RBP17.5■□□□□ 0.39
CDKN3-209ENST00000556102 CLCA3PQ9Y6N3 262 aa17.5■□□□□ 0.39
CDKN3-209ENST00000556102 HCFC1P51610 2035 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 ANKRD17O75179 2603 aaKnown RBP17.49■□□□□ 0.39
CDKN3-209ENST00000556102 PRAMEF4O60810 478 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 CTNSO60931 367 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 STK16O75716 305 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 PIAS1O75925 651 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 OR2J2O76002 312 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 IFNA16P05015 189 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 CCDC166P0CW27 439 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 CAPN3P20807 821 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 HSPA7P48741 367 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 ATP6V0D1P61421 351 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 BMPR2Q13873 1038 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 DOC2AQ14183 400 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 PDK4Q16654 411 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 FBXO48Q5FWF7 155 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 XKR6Q5GH73 641 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 PRAMEF9Q5VWM5 478 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 ADNP2Q6IQ32 1131 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 MEX3BQ6ZN04 569 aaKnown RBP17.49■□□□□ 0.39
CDKN3-209ENST00000556102 C16orf47Q6ZP98 133 aaPredicted RBP17.49■□□□□ 0.39
CDKN3-209ENST00000556102 CAPN12Q6ZSI9 719 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 SPATA6LQ8N4H0 392 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 MARVELD2Q8N4S9 558 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 SNX31Q8N9S9 440 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 OR52N2Q8NGI0 321 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 PTCD3Q96EY7 689 aaKnown RBP17.49■□□□□ 0.39
CDKN3-209ENST00000556102 TREX2Q9BQ50 279 aaPredicted RBP17.49■□□□□ 0.39
CDKN3-209ENST00000556102 EFCAB11Q9BUY7 163 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 TP63Q9H3D4 680 aaPredicted RBP17.49■□□□□ 0.39
CDKN3-209ENST00000556102 DEPPQ9NTK1 212 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 MYOTQ9UBF9 498 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 ZNF490Q9ULM2 529 aaPredicted RBP17.49■□□□□ 0.39
CDKN3-209ENST00000556102 SNX24Q9Y343 169 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 HRH3Q9Y5N1 445 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 SAR1BQ9Y6B6 198 aa17.49■□□□□ 0.39
CDKN3-209ENST00000556102 USP27XA6NNY8 438 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 PHGDHO43175 533 aaKnown RBP17.48■□□□□ 0.39
CDKN3-209ENST00000556102 CD1DP15813 335 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 CD22P20273 847 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 KCNC1P48547 511 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 GNG11P61952 73 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 LAPTM5Q13571 262 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 PAGE2BQ5JRK9 111 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 PAOXQ6QHF9 649 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 IL20RBQ6UXL0 311 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 HSDL2Q6YN16 418 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 CEP128Q6ZU80 1094 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 PDPRQ8NCN5 879 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 BBOF1Q8ND07 529 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 MORN4Q8NDC4 146 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 OR14A16Q8NHC5 309 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 PYROXD1Q8WU10 500 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 ASB5Q8WWX0 329 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 CDKL2Q92772 493 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 KIAA1191Q96A73 305 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 ESAMQ96AP7 390 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 KCNC2Q96PR1 638 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 F2RL3Q96RI0 385 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 RASL10BQ96S79 203 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms