RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 A0A0G2JPF8 293 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 HNRNPCL3B7ZW38 293 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 TOR1BO14657 336 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 CNTN5O94779 1100 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 ITGA5P08648 1049 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 HNRNPCL4P0DMR1 293 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 NCK1P16333 377 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 ZNF8P17098 575 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-216ENST00000556083 MAGEA2P43356 314 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 AQP4P55087 323 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 SCRN3Q0VDG4 424 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 MALLQ13021 153 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 VMACQ2NL98 169 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 ACSBG2Q5FVE4 666 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 C6orf136Q5SQH8 315 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 GDPGP1Q6ZNW5 385 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 ZNF627Q7L945 461 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 AQP11Q8NBQ7 271 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 SETD6Q8TBK2 473 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 CCDC115Q96NT0 180 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 B3GNT4Q9C0J1 378 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 ALKBH4Q9NXW9 302 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 SRPK3Q9UPE1 567 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 CCRL2O00421 344 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 CCL22O00626 93 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 ANKRD28O15084 1053 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 FOXN2P32314 431 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 OR2B6P58173 313 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 ST3GAL4Q11206 333 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 MLIPQ5VWP3 458 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 SLC39A4Q6P5W5 647 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 LRRC69Q6ZNQ3 347 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 GRASPQ7Z6J2 395 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-216ENST00000556083 GALNT12Q8IXK2 581 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 PQLC3Q8N755 202 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 ZNF709Q8N972 641 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 OR4E2Q8NGC2 313 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 NFKBIDQ8NI38 313 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 PPP1R35Q8TAP8 253 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 LRRN4Q8WUT4 740 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 BIRC7Q96CA5 298 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 HSPA12BQ96MM6 686 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 NECAB3Q96P71 396 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-216ENST00000556083 PIP5K1AQ99755 562 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 MROQ9BYG7 248 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 ADAMTS10Q9H324 1103 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 TBCCD1Q9NVR7 557 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 SIX4Q9UIU6 781 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 PIAS1O75925 651 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 RHOP08100 348 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 FBLP22087 321 aaKnown RBP10.32□□□□□ -0.76
ACTN1-216ENST00000556083 THBS2P35442 1172 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 CLDN8P56748 225 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 TRA2BP62995 288 aaKnown RBP10.32□□□□□ -0.76
ACTN1-216ENST00000556083 E2F1Q01094 437 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 FGL1Q08830 312 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 PMS2P3Q13401 168 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 ZNF829Q3KNS6 432 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-216ENST00000556083 FLYWCH1Q4VC44 716 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 SATL1Q86VE3 508 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 SMPDL3BQ92485 455 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 TWNKQ96RR1 684 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 POLDIP3Q9BY77 421 aaKnown RBP10.32□□□□□ -0.76
ACTN1-216ENST00000556083 SAGE1Q9NXZ1 904 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 RARRES3Q9UL19 164 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 PPM1HQ9ULR3 514 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 WNT6Q9Y6F9 365 aa10.32□□□□□ -0.76
ACTN1-216ENST00000556083 NPIPA2E9PIF3 369 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 NPIPA3F8WFD2 350 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 POLR1CO15160 346 aaPredicted RBP10.31□□□□□ -0.76
ACTN1-216ENST00000556083 LAMTOR5O43504 91 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 EEDO75530 441 aaKnown RBP10.31□□□□□ -0.76
ACTN1-216ENST00000556083 TBX18O95935 607 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 ASGR2P07307 311 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 HCKP08631 526 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 ACRP10323 421 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 RORAP35398 523 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 RBMXP38159 391 aaKnown RBP10.31□□□□□ -0.76
ACTN1-216ENST00000556083 AFF1P51825 1210 aaKnown RBP10.31□□□□□ -0.76
ACTN1-216ENST00000556083 CSTF1Q05048 431 aaKnown RBP10.31□□□□□ -0.76
ACTN1-216ENST00000556083 PRRT3Q5FWE3 981 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 ZNF852Q6ZMS4 543 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 TCEAL8Q8IYN2 117 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 ZNF615Q8N8J6 731 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 TRUB1Q8WWH5 349 aaKnown RBP10.31□□□□□ -0.76
ACTN1-216ENST00000556083 SLC30A2Q9BRI3 323 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 OR10A4Q9H209 315 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 SEC61A2Q9H9S3 476 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 MEAF6Q9HAF1 191 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 NUDT15Q9NV35 164 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 XRN1Q8IZH2 1706 aaKnown RBP10.31□□□□□ -0.76
ACTN1-216ENST00000556083 GXYLT2A0PJZ3 443 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 EFCAB7A8K855 629 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 ADAP00813 363 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 G6PDP11413 515 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 POU2F1P14859 743 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 AGTR1P30556 359 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 S100A7P31151 101 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 CSNK1DP48730 415 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 RAB28P51157 221 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms