RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 NOA1Q8NC60 698 aaKnown RBP11.07□□□□□ -0.64
VRK1-204ENST00000555351 FAM98AQ8NCA5 519 aaKnown RBP11.07□□□□□ -0.64
VRK1-204ENST00000555351 APCDD1LQ8NCL9 501 aa11.07□□□□□ -0.64
VRK1-204ENST00000555351 OR7G3Q8NG95 312 aa11.07□□□□□ -0.64
VRK1-204ENST00000555351 THAP3Q8WTV1 239 aaPredicted RBP11.07□□□□□ -0.64
VRK1-204ENST00000555351 KCTD4Q8WVF5 259 aa11.07□□□□□ -0.64
VRK1-204ENST00000555351 EXT2Q93063 718 aa11.07□□□□□ -0.64
VRK1-204ENST00000555351 REPS1Q96D71 796 aa11.07□□□□□ -0.64
VRK1-204ENST00000555351 VMP1Q96GC9 406 aa11.07□□□□□ -0.64
VRK1-204ENST00000555351 MAGEB10Q96LZ2 347 aaPredicted RBP11.07□□□□□ -0.64
VRK1-204ENST00000555351 GPR78Q96P69 363 aa11.07□□□□□ -0.64
VRK1-204ENST00000555351 CENPKQ9BS16 269 aa11.07□□□□□ -0.64
VRK1-204ENST00000555351 DEFB126Q9BYW3 111 aa11.07□□□□□ -0.64
VRK1-204ENST00000555351 CDC42EP4Q9H3Q1 356 aaKnown RBP11.07□□□□□ -0.64
VRK1-204ENST00000555351 CDCP1Q9H5V8 836 aa11.07□□□□□ -0.64
VRK1-204ENST00000555351 MS4A12Q9NXJ0 267 aa11.07□□□□□ -0.64
VRK1-204ENST00000555351 KCMF1Q9P0J7 381 aa11.07□□□□□ -0.64
VRK1-204ENST00000555351 PPT2Q9UMR5 302 aa11.07□□□□□ -0.64
VRK1-204ENST00000555351 ASB1Q9Y576 335 aa11.07□□□□□ -0.64
VRK1-204ENST00000555351 CLDN16Q9Y5I7 305 aa11.07□□□□□ -0.64
VRK1-204ENST00000555351 IKBKGQ9Y6K9 419 aa11.07□□□□□ -0.64
VRK1-204ENST00000555351 H0YIV9 168 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 FCHO1O14526 889 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 KRT38O76015 456 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 NEURL1O76050 574 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 SP1P08047 785 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 INHBAP08476 426 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 RBP1P09455 135 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 GFAPP14136 432 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 HIST1H1TP22492 207 aaPredicted RBP11.06□□□□□ -0.64
VRK1-204ENST00000555351 ATP5A1P25705 553 aaKnown RBP11.06□□□□□ -0.64
VRK1-204ENST00000555351 CERS1P27544 350 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 EEF1DP29692 281 aaKnown RBP11.06□□□□□ -0.64
VRK1-204ENST00000555351 CYB561P49447 251 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 HLCSP50747 726 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 GPR143P51810 404 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 PHEXP78562 749 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 RBPJQ06330 500 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 SLC13A2Q13183 592 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 BMPR2Q13873 1038 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 SERTAD2Q14140 314 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 PFKFB4Q16877 469 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 TSNAXIP1Q2TAA8 658 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 AP5B1Q2VPB7 878 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 KRTCAP3Q53RY4 240 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 FBXO48Q5FWF7 155 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 DEPDC1Q5TB30 811 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 KHDRBS2Q5VWX1 349 aaKnown RBP11.06□□□□□ -0.64
VRK1-204ENST00000555351 FCRLBQ6BAA4 426 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 SLC25A25Q6KCM7 469 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 MAMDC2Q7Z304 686 aaPredicted RBP11.06□□□□□ -0.64
VRK1-204ENST00000555351 TEX9Q8N6V9 391 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 CEP112Q8N8E3 955 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 ACOT4Q8N9L9 421 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 L3MBTL4Q8NA19 623 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 MORN4Q8NDC4 146 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 KIF18AQ8NI77 898 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 ZNF592Q92610 1267 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 DAZLQ92904 295 aaKnown RBP11.06□□□□□ -0.64
VRK1-204ENST00000555351 SIGLEC12Q96PQ1 595 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 F2RL3Q96RI0 385 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 CCDC77Q9BR77 488 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 LRFN1Q9P244 771 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 SEC14L3Q9UDX4 400 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 VTI1BQ9UEU0 232 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 OSGIN2Q9Y236 505 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 ANGPTL3Q9Y5C1 460 aa11.06□□□□□ -0.64
VRK1-204ENST00000555351 SPTAN1Q13813 2472 aaKnown RBP11.06□□□□□ -0.64
VRK1-204ENST00000555351 A0A087WUV0 522 aaPredicted RBP11.05□□□□□ -0.64
VRK1-204ENST00000555351 A0A0G2JN53 185 aa11.05□□□□□ -0.64
VRK1-204ENST00000555351 STX16-NPEPL1H3BU86 382 aa11.05□□□□□ -0.64
VRK1-204ENST00000555351 STX16O14662 325 aa11.05□□□□□ -0.64
VRK1-204ENST00000555351 MAST4O15021 2626 aa11.05□□□□□ -0.64
VRK1-204ENST00000555351 MYO1DO94832 1006 aa11.05□□□□□ -0.64
VRK1-204ENST00000555351 F10P00742 488 aa11.05□□□□□ -0.64
VRK1-204ENST00000555351 ABHD2P08910 425 aa11.05□□□□□ -0.64
VRK1-204ENST00000555351 PTX3P26022 381 aaPredicted RBP11.05□□□□□ -0.64
VRK1-204ENST00000555351 TPP2P29144 1249 aaPredicted RBP11.05□□□□□ -0.64
VRK1-204ENST00000555351 ECHS1P30084 290 aa11.05□□□□□ -0.64
VRK1-204ENST00000555351 PPP2R1BP30154 601 aa11.05□□□□□ -0.64
VRK1-204ENST00000555351 GMPRP36959 345 aa11.05□□□□□ -0.64
VRK1-204ENST00000555351 IRF9Q00978 393 aa11.05□□□□□ -0.64
VRK1-204ENST00000555351 OC90Q02509 493 aaPredicted RBP11.05□□□□□ -0.64
VRK1-204ENST00000555351 CUL3Q13618 768 aa11.05□□□□□ -0.64
VRK1-204ENST00000555351 UAP1Q16222 522 aaPredicted RBP11.05□□□□□ -0.64
VRK1-204ENST00000555351 TECRLQ5HYJ1 363 aa11.05□□□□□ -0.64
VRK1-204ENST00000555351 OR4C11Q6IEV9 310 aa11.05□□□□□ -0.64
VRK1-204ENST00000555351 ADNP2Q6IQ32 1131 aa11.05□□□□□ -0.64
VRK1-204ENST00000555351 MTFR2Q6P444 385 aa11.05□□□□□ -0.64
VRK1-204ENST00000555351 GFRALQ6UXV0 394 aa11.05□□□□□ -0.64
VRK1-204ENST00000555351 UBE3DQ7Z6J8 389 aa11.05□□□□□ -0.64
VRK1-204ENST00000555351 LCA5Q86VQ0 697 aa11.05□□□□□ -0.64
VRK1-204ENST00000555351 GPALPP1Q8IXQ4 340 aa11.05□□□□□ -0.64
VRK1-204ENST00000555351 ZCCHC7Q8N3Z6 543 aaKnown RBP11.05□□□□□ -0.64
VRK1-204ENST00000555351 KIF2BQ8N4N8 673 aa11.05□□□□□ -0.64
VRK1-204ENST00000555351 POGLUT1Q8NBL1 392 aa11.05□□□□□ -0.64
VRK1-204ENST00000555351 OR8K3Q8NH51 312 aa11.05□□□□□ -0.64
VRK1-204ENST00000555351 OR14A16Q8NHC5 309 aa11.05□□□□□ -0.64
VRK1-204ENST00000555351 IFT81Q8WYA0 676 aa11.05□□□□□ -0.64
VRK1-204ENST00000555351 RGMAQ96B86 450 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms