RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 RAB8AP61006 207 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 NCALDP61601 193 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 HMGCS1Q01581 520 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 ZNF33BQ06732 778 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 COL9A2Q14055 689 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-218ENST00000555213 SGO1Q5FBB7 561 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 MLIPQ5VWP3 458 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 KHDRBS2Q5VWX1 349 aaKnown RBP10.33□□□□□ -0.76
SHMT2-218ENST00000555213 NXNQ6DKJ4 435 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 FAM199XQ6PEV8 388 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-218ENST00000555213 CCDC121Q6ZUS5 278 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 VN1R5Q7Z5H4 357 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 FUNDC1Q8IVP5 155 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 DDIASQ8IXT1 998 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 ARHGEF39Q8N4T4 335 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 AFAP1L2Q8N4X5 818 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 ENDOVQ8N8Q3 282 aaKnown RBP10.33□□□□□ -0.76
SHMT2-218ENST00000555213 OR9A4Q8NGU2 314 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 FBXO27Q8NI29 283 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 UTP15Q8TED0 518 aaKnown RBP10.33□□□□□ -0.76
SHMT2-218ENST00000555213 SELENOMQ8WWX9 145 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 STARD8Q92502 1023 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 MS4A6EQ96DS6 147 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 C11orf24Q96F05 449 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-218ENST00000555213 MARK4Q96L34 752 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 SERPINI1Q99574 410 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 YIPF2Q9BWQ6 316 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 MS4A8Q9BY19 250 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 CLK4Q9HAZ1 481 aaKnown RBP10.33□□□□□ -0.76
SHMT2-218ENST00000555213 MKKSQ9NPJ1 570 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-218ENST00000555213 ZMIZ1Q9ULJ6 1067 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 PPT2Q9UMR5 302 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 TRIM33Q9UPN9 1127 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 MRPS2Q9Y399 296 aaKnown RBP10.33□□□□□ -0.76
SHMT2-218ENST00000555213 MAP4K5Q9Y4K4 846 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 PCDHGA6Q9Y5G7 932 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 GPR45Q9Y5Y3 372 aa10.33□□□□□ -0.76
SHMT2-218ENST00000555213 LOC101059948A0A1B0GTJ6 334 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 ZNF891A8MT65 544 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-218ENST00000555213 MAGEB17A8MXT2 336 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 SGK494L7N484 410 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 PSMD12O00232 456 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-218ENST00000555213 SLC28A1O00337 649 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 ANKRD28O15084 1053 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 UBDO15205 165 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 FOXS1O43638 330 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 VPS4BO75351 444 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 RDH16O75452 317 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 SEMA3DO95025 777 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 MED26O95402 600 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 ETHE1O95571 254 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 ONECUT2O95948 504 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 TGFB1P01137 390 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 HSD3B1P14060 373 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 IL10P22301 178 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 HSD3B2P26439 372 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 PIK3R1P27986 724 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 ADSLP30566 484 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-218ENST00000555213 HNRNPH1P31943 449 aaKnown RBP10.32□□□□□ -0.76
SHMT2-218ENST00000555213 SSR2P43308 183 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 TSFMP43897 325 aaKnown RBP10.32□□□□□ -0.76
SHMT2-218ENST00000555213 ARFIP1P53367 373 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 PLA2G16P53816 162 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 MTTPP55157 894 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 RPS13P62277 151 aaKnown RBP10.32□□□□□ -0.76
SHMT2-218ENST00000555213 BTN3A2P78410 334 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 TLE3Q04726 772 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 EMX2Q04743 252 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 HYAL2Q12891 473 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 CSTF3Q12996 717 aaKnown RBP10.32□□□□□ -0.76
SHMT2-218ENST00000555213 CUL3Q13618 768 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 AP5B1Q2VPB7 878 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 ADPRMQ3LIE5 342 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 CCDC81Q6ZN84 652 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 ASRGL1Q7L266 308 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 OVCH1Q7RTY7 1134 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 GBP7Q8N8V2 638 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-218ENST00000555213 ADAMTS18Q8TE60 1221 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 NUDT8Q8WV74 236 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 RGMAQ96B86 450 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 TUBGCP3Q96CW5 907 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 TEX37Q96LM6 180 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 F2RL3Q96RI0 385 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 TBCDQ9BTW9 1192 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 ACPTQ9BZG2 426 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 SLC26A1Q9H2B4 701 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 ACTL8Q9H568 366 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 BRF2Q9HAW0 419 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 AHSPQ9NZD4 102 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 HCN3Q9P1Z3 774 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 FARSAQ9Y285 508 aaKnown RBP10.32□□□□□ -0.76
SHMT2-218ENST00000555213 SPACA6W5XKT8 324 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 AKAP13Q12802 2813 aa10.32□□□□□ -0.76
SHMT2-218ENST00000555213 ARHGAP10A1A4S6 786 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 ZNF860A6NHJ4 632 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 UNC5CO95185 931 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 JAK1P23458 1154 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 IL12AP29459 219 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 ATP4BP51164 291 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 TBL3Q12788 808 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms