RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 HNRNPFP52597 415 aaKnown RBP11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 VSNL1P62760 191 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 ID2Q02363 134 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 RBPJQ06330 500 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 DDX39BQ13838 428 aaKnown RBP11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 SLC29A2Q14542 456 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 TECRLQ5HYJ1 363 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 TRIM40Q6P9F5 258 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 TIFABQ6ZNK6 161 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 QSOX2Q6ZRP7 698 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 SH2D5Q6ZV89 423 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 ZGRF1Q86YA3 2104 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 HORMAD2Q8N7B1 307 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 TMEM52Q8NDY8 209 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 RHEBL1Q8TAI7 183 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 UHMK1Q8TAS1 419 aaKnown RBP11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 STAG3L4Q8TBR4 150 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 ELP5Q8TE02 316 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.52□□□□□ -0.571e-6■■■■■ 65.2
CCDC85C-202ENST00000554877 WDR34Q96EX3 536 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 PTCD3Q96EY7 689 aaKnown RBP11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 CD244Q9BZW8 370 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 NMRAL1Q9HBL8 299 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 ZNF358Q9NW07 568 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 GPRC5BQ9NZH0 403 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 ACOT9Q9Y305 439 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 SPTAN1Q13813 2472 aaKnown RBP11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 A0A087X1B8 175 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 A0A096LPK6 155 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 TCRBV16S1A1N1A0A5B0 115 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 PRSS44E7EML9 344 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 RTCAO00442 366 aaKnown RBP11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 FCHO1O14526 889 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 CLEC3AO75596 197 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 KLHL2O95198 593 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 SHBGP04278 402 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 STSP08842 583 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 CNTFP26441 200 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 ARL1P40616 181 aaPredicted RBP11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 RFC3P40938 356 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 CYB561P49447 251 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 SERPINB8P50452 374 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 CLCN2P51788 898 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 CASP6P55212 293 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 RAB38P57729 211 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 TGM3Q08188 693 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 ZRSR2Q15696 482 aaKnown RBP11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 INAQ16352 499 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 PAGE2BQ5JRK9 111 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 SP5Q6BEB4 398 aaPredicted RBP11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 WDR93Q6P2C0 686 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 C16orf47Q6ZP98 133 aaPredicted RBP11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 VN1R5Q7Z5H4 357 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 RNF175Q8N4F7 328 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 TMEM156Q8N614 296 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 TEX9Q8N6V9 391 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 TMEM178AQ8NBL3 297 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 FAM98AQ8NCA5 519 aaKnown RBP11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 MDS2Q8NDY4 140 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 OR2L5Q8NG80 312 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 AENQ8WTP8 325 aaKnown RBP11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 NCLNQ969V3 563 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 TMEM125Q96AQ2 219 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 CSF3RQ99062 836 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 CCDC77Q9BR77 488 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 VPS11Q9H270 941 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 NT5DC2Q9H857 520 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 CLK4Q9HAZ1 481 aaKnown RBP11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 OPTCQ9UBM4 332 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 SUCOQ9UBS9 1254 aaKnown RBP11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 MRPS33Q9Y291 106 aaKnown RBP11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 HIVEP3Q5T1R4 2406 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 MAST4O15021 2626 aa11.51□□□□□ -0.57
CCDC85C-202ENST00000554877 TRIM49D1C9J1S8 452 aa11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 POC1B-GALNT4F8VUJ3 575 aa11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 SLC25A12O75746 678 aa11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 SLU7O95391 586 aaKnown RBP11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 INHBAP08476 426 aa11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 SNRPB2P08579 225 aaKnown RBP11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 GFAPP14136 432 aa11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 CD22P20273 847 aa11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 MTTPP55157 894 aa11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 LIM2P55344 173 aa11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 MLF1P58340 268 aa11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 HSF1Q00613 529 aa11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 STX4Q12846 297 aa11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 LAPTM5Q13571 262 aa11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 ACAP2Q15057 778 aa11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 RASA2Q15283 850 aa11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 AP5B1Q2VPB7 878 aa11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 ABHD17CQ6PCB6 329 aa11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 OR4N5Q8IXE1 308 aa11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 NFAM1Q8NET5 270 aaPredicted RBP11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 DOK4Q8TEW6 326 aa11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 MAGED4Q96JG8 741 aa11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 QRFPRQ96P65 431 aa11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 SERINC2Q96SA4 455 aa11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 MAPKAP1Q9BPZ7 522 aa11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 EFCAB11Q9BUY7 163 aa11.5□□□□□ -0.57
CCDC85C-202ENST00000554877 SORBS1Q9BX66 1292 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms