RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 IGHV4-61A0A0C4DH41 118 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 PMS2P5A8MQ11 134 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 H0Y626 953 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 BLOC1S5-TXNDC5H3BN57 136 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 PSMA7O14818 248 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 PCDH7O60245 1069 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 DFFBO76075 338 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 GJB5O95377 273 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 SLU7O95391 586 aaKnown RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 SNAI1O95863 264 aaPredicted RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 NGFP01138 241 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 CGAP01215 116 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 IGHV4-59P01825 116 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 RPN1P04843 607 aaKnown RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 EDN1P05305 212 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 ERVK-10P10266 1014 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 SPP1P10451 314 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 CASTP20810 708 aaKnown RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 ITGA3P26006 1051 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 WNT5AP41221 380 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 TNNT3P45378 269 aaPredicted RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 RPL21P46778 160 aaKnown RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 VAMP7P51809 220 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 MFAP3P55082 362 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 MTCP1P56278 107 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 SNAP25P60880 206 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 HERV-K104P61576 105 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 TIMM10P62072 90 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 FKBP1AP62942 108 aaKnown RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 DYNLL1P63167 89 aaKnown RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 KCNJ10P78508 379 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 CDR2Q01850 454 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 CNTN2Q02246 1040 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 SIGLEC14Q08ET2 396 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 RASGEF1BQ0VAM2 473 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 ILF2Q12905 390 aaKnown RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 TNK1Q13470 666 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 GPM6BQ13491 265 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 PTK6Q13882 451 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 HERC3Q15034 1050 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 WDR43Q15061 677 aaKnown RBP eCLIP1.36□□□□□ -2.199e-15■□□□□ 10.1
PRPF39-208ENST00000554785 P2RY6Q15077 328 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 NONOQ15233 471 aaKnown RBP eCLIP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 PTGISQ16647 500 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 CTU2Q2VPK5 515 aaKnown RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 TWISTNBQ3B726 338 aaPredicted RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 EPC2Q52LR7 807 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 XKR3Q5GH77 459 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 HERC4Q5GLZ8 1057 aaPredicted RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 SLC35D3Q5M8T2 416 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 OR4A47Q6IF82 309 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 C11orf88Q6PI97 169 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 SH2D5Q6ZV89 423 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 ARMCX2Q7L311 632 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 SLC16A9Q7RTY1 509 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 NRARPQ7Z6K4 114 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 KLHDC8BQ8IXV7 354 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 ZNF843Q8N446 348 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 FAM133AQ8N9E0 248 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 NOA1Q8NC60 698 aaKnown RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 KBTBD8Q8NFY9 601 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 OR10V1Q8NGI7 309 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 HEXDCQ8WVB3 486 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 RAD54LQ92698 747 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 EXOC4Q96A65 974 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 SENP5Q96HI0 755 aaPredicted RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 JAKMIP1Q96N16 626 aaKnown RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 INTS14Q96SY0 518 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 UPF3BQ9BZI7 483 aaKnown RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 MTMR12Q9C0I1 747 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 OR2B2Q9GZK3 357 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 ALDH8A1Q9H2A2 487 aaPredicted RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 CPVLQ9H3G5 476 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 CHST11Q9NPF2 352 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 SLC52A3Q9NQ40 469 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 FAM207AQ9NSI2 230 aaPredicted RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 INTS9Q9NV88 658 aaKnown RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 P4HTMQ9NXG6 502 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 ERAP1Q9NZ08 941 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 KCNJ14Q9UNX9 436 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 TCF19Q9Y242 345 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 C2CD2Q9Y426 696 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 GOLGA4Q13439 2230 aaKnown RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 SPAG17Q6Q759 2223 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 MYH15Q9Y2K3 1946 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 MROH5Q6ZUA9 1318 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 SPTA1P02549 2419 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 GIMAP1-GIMAP5A0A087WTJ2 511 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 C5orf52A6NGY3 159 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 ZNF197O14709 1029 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 IFIT3O14879 490 aaKnown RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 PRAF2O60831 178 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 IDH1O75874 414 aaKnown RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 DDHD2O94830 711 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 PGLSO95336 258 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 CLPTM1O96005 669 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 APOHP02749 345 aaPredicted RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 IQCF3P0C7M6 154 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 ZNF286BP0CG31 522 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 DARSP14868 501 aaKnown RBP1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms