RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 CES4AQ5XG92 561 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 OR6B2Q6IFH4 312 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 TCEAL6Q6IPX3 200 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 MFSD7Q6UXD7 560 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 B3GLCTQ6Y288 498 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 MACC1Q6ZN28 852 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 RFPL4BQ6ZWI9 263 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 CCDC185Q8N715 623 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 TMEM99Q8N816 258 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 RNF149Q8NC42 400 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 TMEM185AQ8NFB2 350 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 RPLP0P6Q8NHW5 317 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 KIAA1524Q8TCG1 905 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 MAPK15Q8TD08 544 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 SLC13A3Q8WWT9 602 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 OMA1Q96E52 524 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 GMPPAQ96IJ6 420 aaPredicted RBP2.67□□□□□ -1.98
SCFD1-213ENST00000554776 ART5Q96L15 291 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 GUCD1Q96NT3 240 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 PCDHB18PQ96TA0 734 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 FAM213AQ9BRX8 229 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 SPXQ9BT56 116 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 CLEC7AQ9BXN2 247 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 DGCR6LQ9BY27 220 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 LRRC2Q9BYS8 371 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 KRT23Q9C075 422 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 ZDHHC6Q9H6R6 413 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 PLCXD1Q9NUJ7 323 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 DDX28Q9NUL7 540 aaKnown RBP2.67□□□□□ -1.98
SCFD1-213ENST00000554776 ATAD3AQ9NVI7 634 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 PLEK2Q9NYT0 353 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 ZNF319Q9P2F9 582 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 SPASTQ9UBP0 616 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 SELENOKQ9Y6D0 94 aa2.67□□□□□ -1.98
SCFD1-213ENST00000554776 ATP6AP2A0A1C7CYW4 349 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 SH3PXD2BA1X283 911 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 SLC9B1P1A6NJY1 282 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 NPIPB9F8W1W9 429 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 SLC28A1O00337 649 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 OGTO15294 1046 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 P2RX6O15547 441 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 KRT33AO76009 404 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 CPNE6O95741 557 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 PTBP3O95758 552 aaKnown RBP2.66□□□□□ -1.98
SCFD1-213ENST00000554776 LYNP07948 512 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 ZCCHC18P0CG32 403 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 KRT3P12035 628 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 ETS1P14921 441 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 MAPK3P27361 379 aaPredicted RBP2.66□□□□□ -1.98
SCFD1-213ENST00000554776 SFNP31947 248 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 HSPA1LP34931 641 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 MMP12P39900 470 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 SLC6A12P48065 614 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 BACE1P56817 501 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 KRTAP10-5P60370 271 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 KRTAP10-12P60413 245 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 SRSF9Q13242 221 aaKnown RBP eCLIP2.66□□□□□ -1.98
SCFD1-213ENST00000554776 MSLNQ13421 630 aaPredicted RBP2.66□□□□□ -1.98
SCFD1-213ENST00000554776 GRB14Q14449 540 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 KARSQ15046 597 aaKnown RBP2.66□□□□□ -1.98
SCFD1-213ENST00000554776 TAB1Q15750 504 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 STX1AQ16623 288 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 SGSM1Q2NKQ1 1148 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 WSCD2Q2TBF2 565 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 SNRNP48Q6IEG0 339 aaKnown RBP2.66□□□□□ -1.98
SCFD1-213ENST00000554776 Q6ZVQ6 151 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 CHMP1BQ7LBR1 199 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 CATSPERDQ86XM0 798 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 WDR49Q8IV35 697 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 DND1Q8IYX4 353 aaKnown RBP2.66□□□□□ -1.98
SCFD1-213ENST00000554776 BATF2Q8N1L9 274 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 SIDT2Q8NBJ9 832 aaKnown RBP2.66□□□□□ -1.98
SCFD1-213ENST00000554776 RELL2Q8NC24 303 aaPredicted RBP2.66□□□□□ -1.98
SCFD1-213ENST00000554776 CCDC197Q8NCU1 140 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 OR4L1Q8NH43 312 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 OR2T6Q8NHC8 308 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 HCAR2Q8TDS4 363 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 MRGPRDQ8TDS7 321 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 CASP10Q92851 521 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 ESAMQ96AP7 390 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 CNRIP1Q96F85 164 aaPredicted RBP2.66□□□□□ -1.98
SCFD1-213ENST00000554776 C16orf58Q96GQ5 468 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 PCED1BQ96HM7 432 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 NAP1L3Q99457 506 aaPredicted RBP2.66□□□□□ -1.98
SCFD1-213ENST00000554776 AGPAT1Q99943 283 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 PKP2Q99959 881 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 EGLN1Q9GZT9 426 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 DDX47Q9H0S4 455 aaKnown RBP2.66□□□□□ -1.98
SCFD1-213ENST00000554776 CXXC4Q9H2H0 198 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 PIGVQ9NUD9 493 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 COPS7AQ9UBW8 275 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 FAM153AQ9UHL3 310 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 BAIAP2L1Q9UHR4 511 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 CSNK1G3Q9Y6M4 447 aa2.66□□□□□ -1.98
SCFD1-213ENST00000554776 IGKV3D-15A0A087WSY6 115 aa2.65□□□□□ -1.99
SCFD1-213ENST00000554776 A0A0U1RRA0 63 aa2.65□□□□□ -1.99
SCFD1-213ENST00000554776 A0A1B0GU03 582 aa2.65□□□□□ -1.99
SCFD1-213ENST00000554776 hCG_38984A0A1B0GV85 526 aa2.65□□□□□ -1.99
SCFD1-213ENST00000554776 SERINC4A6NH21 518 aa2.65□□□□□ -1.99
SCFD1-213ENST00000554776 SHISA7A6NL88 538 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms