RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 WHRNQ9P202 907 aa17.48■□□□□ 0.39
CPSF2-203ENST00000554290 ZNF223Q9UK11 482 aaPredicted RBP17.48■□□□□ 0.39
CPSF2-203ENST00000554290 ZNF490Q9ULM2 529 aaPredicted RBP17.48■□□□□ 0.39
CPSF2-203ENST00000554290 DAPP1Q9UN19 280 aa17.48■□□□□ 0.39
CPSF2-203ENST00000554290 ERVK-11Q9UQG0 969 aa17.48■□□□□ 0.39
CPSF2-203ENST00000554290 APCP25054 2843 aa17.48■□□□□ 0.39
CPSF2-203ENST00000554290 CXorf49A8MYA2 514 aaPredicted RBP17.47■□□□□ 0.39
CPSF2-203ENST00000554290 TGFBR3LH3BV60 316 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 CYR61O00622 381 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 CTNSO60931 367 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 CD1DP15813 335 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 PPP2R1BP30154 601 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 PTGER1P34995 402 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 PTGS2P35354 604 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 GP5P40197 560 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 KCNC1P48547 511 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 GPR143P51810 404 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 HNRNPFP52597 415 aaKnown RBP17.47■□□□□ 0.39
CPSF2-203ENST00000554290 LIM2P55344 173 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 IRF8Q02556 426 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 C3P1Q6ZMU1 363 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 C3orf62Q6ZUJ4 267 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 MDGA2Q7Z553 956 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 VN1R5Q7Z5H4 357 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 CLNKQ7Z7G1 428 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 GPALPP1Q8IXQ4 340 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 ZFP62Q8NB50 900 aaPredicted RBP17.47■□□□□ 0.39
CPSF2-203ENST00000554290 SRFBP1Q8NEF9 429 aaKnown RBP17.47■□□□□ 0.39
CPSF2-203ENST00000554290 C16orf52Q8NHV5 167 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 FAM57AQ8TBR7 257 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 DAZLQ92904 295 aaKnown RBP17.47■□□□□ 0.39
CPSF2-203ENST00000554290 ESAMQ96AP7 390 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 KCNC2Q96PR1 638 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 DPH5Q9H2P9 285 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 PRM3Q9NNZ6 103 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 PTBP2Q9UKA9 531 aaKnown RBP17.47■□□□□ 0.39
CPSF2-203ENST00000554290 RNF112Q9ULX5 631 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 CLDN16Q9Y5I7 305 aa17.47■□□□□ 0.39
CPSF2-203ENST00000554290 TCRBV9S1A1TA0A576 114 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 A8MVJ9 347 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 ZNHIT1O43257 154 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 CDC40O60508 579 aaKnown RBP eCLIP17.46■□□□□ 0.39
CPSF2-203ENST00000554290 CCNT2O60583 730 aaKnown RBP17.46■□□□□ 0.39
CPSF2-203ENST00000554290 TBX6O95947 436 aaPredicted RBP17.46■□□□□ 0.39
CPSF2-203ENST00000554290 TUBB4AP04350 444 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 GSTA2P09210 222 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 CERS1P27544 350 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 SPRP35270 261 aaPredicted RBP17.46■□□□□ 0.39
CPSF2-203ENST00000554290 RFC3P40938 356 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 RAB10P61026 200 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 STX4Q12846 297 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 OR4D1Q15615 310 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 FBXO48Q5FWF7 155 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 FGD2Q7Z6J4 655 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 PDPRQ8NCN5 879 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 MORN4Q8NDC4 146 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 CA5BP1Q8WTZ4 195 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 ASB15Q8WXK1 588 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 ANP32BQ92688 251 aaKnown RBP17.46■□□□□ 0.39
CPSF2-203ENST00000554290 UBXN10Q96LJ8 280 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 F2RL3Q96RI0 385 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 DMRTA2Q96SC8 542 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 ALOXE3Q9BYJ1 711 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 PRDM7Q9NQW5 492 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 HPF1Q9NWY4 346 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 COQ3Q9NZJ6 369 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 KCMF1Q9P0J7 381 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 PPT2Q9UMR5 302 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 SPACA6W5XKT8 324 aa17.46■□□□□ 0.39
CPSF2-203ENST00000554290 A0A1B0GTH9 108 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 FAM159BA6NKW6 160 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 ADAM10O14672 748 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 HS6ST1O60243 411 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 PRAMEF4O60810 478 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 OR2J2O76002 312 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 TPOP07202 933 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 GPR85P60893 370 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 MRPS25P82663 173 aaKnown RBP17.45■□□□□ 0.38
CPSF2-203ENST00000554290 CHIT1Q13231 466 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 SERTAD2Q14140 314 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 CDSNQ15517 529 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 TBCCQ15814 346 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 GRTP1Q5TC63 336 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 PRAMEF9Q5VWM5 478 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 PAOXQ6QHF9 649 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 HSDL2Q6YN16 418 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 NCCRP1Q6ZVX7 275 aaPredicted RBP17.45■□□□□ 0.38
CPSF2-203ENST00000554290 CTAGE3PQ8IX95 158 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 PSD4Q8NDX1 1056 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 C7orf57Q8NEG2 295 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 OR14A16Q8NHC5 309 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 STAG3L4Q8TBR4 150 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 UBE2E3Q969T4 207 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 CSF3RQ99062 836 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 TBCDQ9BTW9 1192 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 TRIM8Q9BZR9 551 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 CD244Q9BZW8 370 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 LYRM4Q9HD34 91 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 MYOTQ9UBF9 498 aa17.45■□□□□ 0.38
CPSF2-203ENST00000554290 VTI1BQ9UEU0 232 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms