RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 ZFP36L1Q07352 338 aaKnown RBP7.25□□□□□ -1.25
TDP1-209ENST00000554180 C2orf80Q0P641 193 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 SLAMF1Q13291 335 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 MAPKAPK3Q16644 382 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 SPATS1Q496A3 300 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 SNAP47Q5SQN1 464 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 NDUFAF5Q5TEU4 345 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 PRMT9Q6P2P2 845 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 RINLQ6ZS11 566 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 ARPINQ7Z6K5 226 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 GLRX5Q86SX6 157 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 PIP4P1Q86T03 277 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 RETREG3Q86VR2 466 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 BPHLQ86WA6 291 aaPredicted RBP7.25□□□□□ -1.25
TDP1-209ENST00000554180 SAMD14Q8IZD0 417 aaPredicted RBP7.25□□□□□ -1.25
TDP1-209ENST00000554180 DSELQ8IZU8 1212 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 CDC26Q8NHZ8 85 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 GTF2H4Q92759 462 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 GFM2Q969S9 779 aaKnown RBP7.25□□□□□ -1.25
TDP1-209ENST00000554180 PPCDCQ96CD2 204 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 ZNF501Q96CX3 271 aaPredicted RBP7.25□□□□□ -1.25
TDP1-209ENST00000554180 ITCHQ96J02 903 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 CCDC74BQ96LY2 380 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 C10orf90Q96M02 699 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 CCDC115Q96NT0 180 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 OR52E6Q96RD3 313 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 HOPXQ9BPY8 73 aaPredicted RBP7.25□□□□□ -1.25
TDP1-209ENST00000554180 DUSP26Q9BV47 211 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 SYNDIG1Q9H7V2 258 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 WDR41Q9HAD4 459 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 SPAG4Q9NPE6 437 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 FGF21Q9NSA1 209 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 RXFP3Q9NSD7 469 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 FAM86C1Q9NVL1 165 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 GID8Q9NWU2 228 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 IRAK4Q9NWZ3 460 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 TEX10Q9NXF1 929 aaPredicted RBP7.25□□□□□ -1.25
TDP1-209ENST00000554180 SIDT1Q9NXL6 827 aaKnown RBP7.25□□□□□ -1.25
TDP1-209ENST00000554180 BTNL2Q9UIR0 455 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 SERTAD3Q9UJW9 196 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 ATXN7L1Q9ULK2 861 aaPredicted RBP7.25□□□□□ -1.25
TDP1-209ENST00000554180 PRPF19Q9UMS4 504 aaKnown RBP7.25□□□□□ -1.25
TDP1-209ENST00000554180 DAPP1Q9UN19 280 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 EXO1Q9UQ84 846 aaKnown RBP7.25□□□□□ -1.25
TDP1-209ENST00000554180 ASB4Q9Y574 426 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 PCDHA9Q9Y5H5 950 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 SPACA6W5XKT8 324 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 ZNF292O60281 2723 aa7.25□□□□□ -1.25
TDP1-209ENST00000554180 RALGAPA1Q6GYQ0 2036 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 A0A0G2JN53 185 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 PRSS51A0A1B0GVH4 220 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 HYKKA2RU49 373 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 A8MU76 341 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 FXYD1O00168 92 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 PDPK1O15530 556 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 PROM1O43490 865 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 SCN2BO60939 215 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 ERN1O75460 977 aaKnown RBP7.24□□□□□ -1.25
TDP1-209ENST00000554180 RFPL3O75679 317 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 KCNH1O95259 989 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 AIFM1O95831 613 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 NR2F6P10588 404 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 LAMP1P11279 417 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 PIM1P11309 404 aaPredicted RBP7.24□□□□□ -1.25
TDP1-209ENST00000554180 FOLR1P15328 257 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 IL1RNP18510 177 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 CSTF2P33240 577 aaKnown RBP eCLIP7.24□□□□□ -1.25
TDP1-209ENST00000554180 FRKP42685 505 aaPredicted RBP7.24□□□□□ -1.25
TDP1-209ENST00000554180 AVPR1BP47901 424 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 DGKQP52824 942 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 PDX1P52945 283 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 LIM2P55344 173 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 PHC1P78364 1004 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 TNFRSF17Q02223 184 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 ACTN3Q08043 901 aaPredicted RBP7.24□□□□□ -1.25
TDP1-209ENST00000554180 DMTNQ08495 405 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 NFYCQ13952 458 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 IL11RAQ14626 422 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 KCNAB1Q14722 419 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 CEBPEQ15744 281 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 GPR19Q15760 415 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 PGS1Q32NB8 556 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 PAGE3Q5JUK9 113 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 LRIF1Q5T3J3 769 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 STPG1Q5TH74 334 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 OR4F3Q6IEY1 312 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 OR52E8Q6IFG1 317 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 SLC48A1Q6P1K1 146 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 C8orf82Q6P1X6 216 aaPredicted RBP7.24□□□□□ -1.25
TDP1-209ENST00000554180 RBM44Q6ZP01 1051 aaKnown RBP7.24□□□□□ -1.25
TDP1-209ENST00000554180 DHDDSQ86SQ9 333 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 PDSS2Q86YH6 399 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 TICAM1Q8IUC6 712 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 EFCAB3Q8N7B9 438 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 FAM47BQ8NA70 645 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 AGBL5Q8NDL9 886 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 OR7A2PQ8NGA2 310 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 OR8J3Q8NGG0 315 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 OR1L3Q8NH93 324 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 FBXO27Q8NI29 283 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms