RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 ASB4Q9Y574 426 aa11.56□□□□□ -0.56
SHMT2-209ENST00000553949 AKAP13Q12802 2813 aa11.56□□□□□ -0.56
SHMT2-209ENST00000553949 GOLGA8QA0A0J9YX86 632 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 GNG14A0A1W2PPG7 69 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 GOLGA8OA6NCC3 632 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 C1QTNF9BB2RNN3 333 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 FAM227AF5H4B4 570 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 GOLGA8NF8WBI6 632 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 PSMD12O00232 456 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-209ENST00000553949 DIAPH2O60879 1101 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 CNOT3O75175 753 aaKnown RBP11.55□□□□□ -0.56
SHMT2-209ENST00000553949 BMP10O95393 424 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 FHP07954 510 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 CD63P08962 238 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 ZGLP1P0C6A0 271 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 C1QTNF9P0C862 333 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 PRR35P0CG20 571 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 RNH1P13489 461 aaKnown RBP11.55□□□□□ -0.56
SHMT2-209ENST00000553949 IL10P22301 178 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 F8A1P23610 371 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 LSP1P33241 339 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 AQP5P55064 265 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 HNRNPH2P55795 449 aaKnown RBP11.55□□□□□ -0.56
SHMT2-209ENST00000553949 RAB38P57729 211 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 FOXL2P58012 376 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 RPS15P62841 145 aaKnown RBP11.55□□□□□ -0.56
SHMT2-209ENST00000553949 GNGT1P63211 74 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 SLC9B1Q4ZJI4 515 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 C6orf136Q5SQH8 315 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 NOXRED1Q6NXP6 359 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 EPGNQ6UW88 154 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 UNQ6494/PRO21346Q6UXR6 183 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 LARP4Q71RC2 724 aaKnown RBP eCLIP11.55□□□□□ -0.56
SHMT2-209ENST00000553949 EFCAB3Q8N7B9 438 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 FNDC5Q8NAU1 212 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 ADAMTS18Q8TE60 1221 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 KCNE4Q8WWG9 221 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 KIAA1143Q96AT1 154 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-209ENST00000553949 MIEF2Q96C03 454 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 THOC1Q96FV9 657 aaKnown RBP11.55□□□□□ -0.56
SHMT2-209ENST00000553949 MAELQ96JY0 434 aaKnown RBP11.55□□□□□ -0.56
SHMT2-209ENST00000553949 OR1F2PQ96R84 312 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 CSF3RQ99062 836 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 RBCK1Q9BYM8 510 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 FAM117AQ9C073 453 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 GPN2Q9H9Y4 310 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-209ENST00000553949 NPHS2Q9NP85 383 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 C14orf105Q9NVL8 296 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 NXT1Q9UKK6 140 aaKnown RBP11.55□□□□□ -0.56
SHMT2-209ENST00000553949 FBXW2Q9UKT8 454 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 DLGAP4Q9Y2H0 992 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 PADI2Q9Y2J8 665 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 ATG4BQ9Y4P1 393 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 SPACA6W5XKT8 324 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 SDK2Q58EX2 2172 aa11.55□□□□□ -0.56
SHMT2-209ENST00000553949 A0A1W2PR48 441 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 CYR61O00622 381 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 PROM1O43490 865 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 B4GALT2O60909 372 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 JRKO75564 520 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 CDC123O75794 336 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-209ENST00000553949 KLF7O75840 302 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-209ENST00000553949 ANXA4P09525 319 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-209ENST00000553949 LIFP15018 202 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 ACPPP15309 386 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 LBPP18428 481 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 CPN2P22792 545 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 MAPK1P28482 360 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 PTPN4P29074 926 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 EPHA3P29320 983 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 IDH3AP50213 366 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 TRA2BP62995 288 aaKnown RBP11.54□□□□□ -0.56
SHMT2-209ENST00000553949 TNFRSF17Q02223 184 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 EMX2Q04743 252 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 ERV3-1Q14264 604 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 SMU1Q2TAY7 513 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 FAM69BQ5VUD6 431 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 C18orf63Q68DL7 685 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 CGB2Q6NT52 195 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 SHISA6Q6ZSJ9 500 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 MED25Q71SY5 747 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 VASH2Q86V25 355 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 LAPTM4BQ86VI4 370 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 PRSS58Q8IYP2 241 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 FAM47BQ8NA70 645 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 RFWD2Q8NHY2 731 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 ACTRT2Q8TDY3 377 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 C16orf78Q8WTQ4 265 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 TM4SF18Q96CE8 201 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 CHMP6Q96FZ7 201 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 OR52B2Q96RD2 323 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 SPSB2Q99619 263 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 SIKE1Q9BRV8 207 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 C1orf50Q9BV19 199 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 TRIM55Q9BYV6 548 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 DPH1Q9BZG8 443 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 SOX17Q9H6I2 414 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-209ENST00000553949 LANCL2Q9NS86 450 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 WDR70Q9NW82 654 aa11.54□□□□□ -0.56
SHMT2-209ENST00000553949 MS4A12Q9NXJ0 267 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms