RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 RRADP55042 308 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 TRAP1Q12931 704 aaKnown RBP15.23■□□□□ 0.03
ACTN1-209ENST00000553659 GRB7Q14451 532 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 NR6A1Q15406 480 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 EIF2S3LQ2VIR3 472 aaKnown RBP15.23■□□□□ 0.03
ACTN1-209ENST00000553659 PRR30Q53SZ7 412 aaPredicted RBP15.23■□□□□ 0.03
ACTN1-209ENST00000553659 FBXO48Q5FWF7 155 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 C6orf136Q5SQH8 315 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 SWT1Q5T5J6 900 aaKnown RBP15.23■□□□□ 0.03
ACTN1-209ENST00000553659 FAM69BQ5VUD6 431 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 SLC6A19Q695T7 634 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 FAM198BQ6UWH4 519 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 LILRA3Q8N6C8 439 aaPredicted RBP15.23■□□□□ 0.03
ACTN1-209ENST00000553659 RBMXL3Q8N7X1 1067 aaKnown RBP15.23■□□□□ 0.03
ACTN1-209ENST00000553659 SNX31Q8N9S9 440 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 HMGCLL1Q8TB92 370 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 HM13Q8TCT9 377 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 LCN9Q8WX39 176 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 FERD3LQ96RJ6 166 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 NPAS2Q99743 824 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 DPH2Q9BQC3 489 aaPredicted RBP15.23■□□□□ 0.03
ACTN1-209ENST00000553659 MFRPQ9BY79 579 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 ACTR8Q9H981 624 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 S100A14Q9HCY8 104 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 GPR83Q9NYM4 423 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 LUZP4Q9P127 313 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 SUCOQ9UBS9 1254 aaKnown RBP15.23■□□□□ 0.03
ACTN1-209ENST00000553659 L3MBTL1Q9Y468 752 aa15.23■□□□□ 0.03
ACTN1-209ENST00000553659 MDC1Q14676 2089 aaKnown RBP15.23■□□□□ 0.03
ACTN1-209ENST00000553659 C15orf38-AP3S2A0A0A6YYH1 394 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 A0A1B0GTL3 188 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 A0A1W2PP18 115 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 NPIPB8E9PQR5 432 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 H0Y3Z8 333 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 BTN3A3O00478 584 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 CFLARO15519 480 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 PDE5AO76074 875 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 RNF224P0DH78 156 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 ST6GAL1P15907 406 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 MAPK1P28482 360 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 PCDH1Q08174 1060 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 RPA4Q13156 261 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 MRPL49Q13405 166 aaKnown RBP15.22■□□□□ 0.03
ACTN1-209ENST00000553659 RCAN2Q14206 197 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 NCF4Q15080 339 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 IMPG1Q17R60 797 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 CMPK2Q5EBM0 449 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 C10orf62Q5T681 223 aaPredicted RBP15.22■□□□□ 0.03
ACTN1-209ENST00000553659 LIPJQ5W064 366 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 BLOC1S3Q6QNY0 202 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 Q6ZSR9 355 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 ARPINQ7Z6K5 226 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 L3MBTL4Q8NA19 623 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 GLB1L3Q8NCI6 653 aaPredicted RBP15.22■□□□□ 0.03
ACTN1-209ENST00000553659 ZBTB18Q99592 522 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 TACO1Q9BSH4 297 aaKnown RBP15.22■□□□□ 0.03
ACTN1-209ENST00000553659 SLC7A5P2Q9GIP4 190 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 GPRC5BQ9NZH0 403 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 C5AR2Q9P296 337 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 NKX1-2Q9UD57 310 aaPredicted RBP15.22■□□□□ 0.03
ACTN1-209ENST00000553659 LEF1Q9UJU2 399 aaPredicted RBP15.22■□□□□ 0.03
ACTN1-209ENST00000553659 C15orf41Q9Y2V0 281 aa15.22■□□□□ 0.03
ACTN1-209ENST00000553659 MANBAO00462 879 aa15.21■□□□□ 0.03
ACTN1-209ENST00000553659 NR5A2O00482 541 aa15.21■□□□□ 0.03
ACTN1-209ENST00000553659 LSM1O15116 133 aaKnown RBP15.21■□□□□ 0.03
ACTN1-209ENST00000553659 RSL1D1O76021 490 aaKnown RBP15.21■□□□□ 0.03
ACTN1-209ENST00000553659 HBQ1P09105 142 aa15.21■□□□□ 0.03
ACTN1-209ENST00000553659 AGXTP21549 392 aa15.21■□□□□ 0.03
ACTN1-209ENST00000553659 PRPH2P23942 346 aa15.21■□□□□ 0.03
ACTN1-209ENST00000553659 PTDSS1P48651 473 aaKnown RBP15.21■□□□□ 0.03
ACTN1-209ENST00000553659 PRKG2Q13237 762 aa15.21■□□□□ 0.03
ACTN1-209ENST00000553659 FLOT2Q14254 428 aa15.21■□□□□ 0.03
ACTN1-209ENST00000553659 C18orf21Q32NC0 220 aaPredicted RBP15.21■□□□□ 0.03
ACTN1-209ENST00000553659 PTCHD3Q3KNS1 767 aa15.21■□□□□ 0.03
ACTN1-209ENST00000553659 C8orf82Q6P1X6 216 aaPredicted RBP15.21■□□□□ 0.03
ACTN1-209ENST00000553659 RAB43Q86YS6 212 aa15.21■□□□□ 0.03
ACTN1-209ENST00000553659 FUNDC1Q8IVP5 155 aa15.21■□□□□ 0.03
ACTN1-209ENST00000553659 PRR7Q8TB68 274 aa15.21■□□□□ 0.03
ACTN1-209ENST00000553659 CCDC124Q96CT7 223 aaKnown RBP15.21■□□□□ 0.03
ACTN1-209ENST00000553659 ASB9Q96DX5 294 aa15.21■□□□□ 0.03
ACTN1-209ENST00000553659 SPDL1Q96EA4 605 aa15.21■□□□□ 0.03
ACTN1-209ENST00000553659 METTL2AQ96IZ6 378 aaKnown RBP15.21■□□□□ 0.03
ACTN1-209ENST00000553659 TRAPPC9Q96Q05 1148 aa15.21■□□□□ 0.03
ACTN1-209ENST00000553659 CDK15Q96Q40 435 aa15.21■□□□□ 0.03
ACTN1-209ENST00000553659 OR52A5Q9H2C5 316 aa15.21■□□□□ 0.03
ACTN1-209ENST00000553659 MUC13Q9H3R2 512 aa15.21■□□□□ 0.03
ACTN1-209ENST00000553659 ELOVL6Q9H5J4 265 aa15.21■□□□□ 0.03
ACTN1-209ENST00000553659 ADA2Q9NZK5 511 aa15.21■□□□□ 0.03
ACTN1-209ENST00000553659 MAP10Q9P2G4 905 aa15.21■□□□□ 0.03
ACTN1-209ENST00000553659 PADI2Q9Y2J8 665 aa15.21■□□□□ 0.03
ACTN1-209ENST00000553659 TMED5Q9Y3A6 229 aa15.21■□□□□ 0.03
ACTN1-209ENST00000553659 PTGDR2Q9Y5Y4 395 aa15.21■□□□□ 0.03
ACTN1-209ENST00000553659 TEX15Q9BXT5 2789 aa15.21■□□□□ 0.03
ACTN1-209ENST00000553659 SNRNP200O75643 2136 aaKnown RBP15.2■□□□□ 0.02
ACTN1-209ENST00000553659 NBPF19A0A087WUL8 3843 aa15.2■□□□□ 0.02
ACTN1-209ENST00000553659 CCDC154A6NI56 674 aa15.2■□□□□ 0.02
ACTN1-209ENST00000553659 C9J4A7 227 aa15.2■□□□□ 0.02
ACTN1-209ENST00000553659 E7EQ34 232 aa15.2■□□□□ 0.02
ACTN1-209ENST00000553659 FBP2O00757 339 aa15.2■□□□□ 0.02
ACTN1-209ENST00000553659 ZNF749O43361 778 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms