RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 STRA8Q7Z7C7 330 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 CLNKQ7Z7G1 428 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 SULF2Q8IWU5 870 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 LINC00528Q8N1L1 170 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 KRT78Q8N1N4 520 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 CA13Q8N1Q1 262 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 AGGF1Q8N302 714 aaeCLIP9.25□□□□□ -0.93
ACTN1-208ENST00000553370 RASGEF1CQ8N431 466 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 NKAPQ8N5F7 415 aaKnown RBP9.25□□□□□ -0.93
ACTN1-208ENST00000553370 FAM47BQ8NA70 645 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 OR4K1Q8NGD4 311 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 OR10Q1Q8NGQ4 319 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 RND1Q92730 232 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 NCLNQ969V3 563 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 GAL3ST3Q96A11 431 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 C14orf79Q96F83 325 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 VPS39Q96JC1 886 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 OR4K3Q96R72 315 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 SPOCK3Q9BQ16 436 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 SPNS1Q9H2V7 528 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 ACBD3Q9H3P7 528 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 EXO5Q9H790 373 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 CLK4Q9HAZ1 481 aaKnown RBP9.25□□□□□ -0.93
ACTN1-208ENST00000553370 MCCC2Q9HCC0 563 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 KCNJ16Q9NPI9 418 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 NECTIN3Q9NQS3 549 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 PRTFDC1Q9NRG1 225 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 KCMF1Q9P0J7 381 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 CTNNAL1Q9UBT7 734 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 SLC22A14Q9Y267 594 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 VWA7Q9Y334 891 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 CLCA3PQ9Y6N3 262 aa9.25□□□□□ -0.93
ACTN1-208ENST00000553370 NKX2-6A6NCS4 301 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 SYNDIG1LA6NDD5 238 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 ANKDD1BA6NHY2 528 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 NCF1BA6NI72 391 aaPredicted RBP9.24□□□□□ -0.93
ACTN1-208ENST00000553370 NCF1CA8MVU1 366 aaPredicted RBP9.24□□□□□ -0.93
ACTN1-208ENST00000553370 ZFAND5O76080 213 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 ZWINTO95229 277 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 AHSGP02765 367 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 S100BP04271 92 aaPredicted RBP9.24□□□□□ -0.93
ACTN1-208ENST00000553370 SERPINA6P08185 405 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 NCF1P14598 390 aaPredicted RBP9.24□□□□□ -0.93
ACTN1-208ENST00000553370 GNAZP19086 355 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 TNNI3P19429 210 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 TFEBP19484 476 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 TRHRP34981 398 aaPredicted RBP9.24□□□□□ -0.93
ACTN1-208ENST00000553370 HNMTP50135 292 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 POU4F2Q12837 409 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 STX4Q12846 297 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 SLBPQ14493 270 aaKnown RBP eCLIP9.24□□□□□ -0.93
ACTN1-208ENST00000553370 CDSNQ15517 529 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 TERF2Q15554 542 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 CYP1B1Q16678 543 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 RNFT1Q5M7Z0 435 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 IL20RBQ6UXL0 311 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 GK5Q6ZS86 529 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 BTLAQ7Z6A9 289 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 ADAMTSL2Q86TH1 951 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 LRRC8AQ8IWT6 810 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 CNTN4Q8IWV2 1026 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.24□□□□□ -0.935e-8■■■■■ 204.6
ACTN1-208ENST00000553370 SNX31Q8N9S9 440 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 DMRTA2Q96SC8 542 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 OSBPL9Q96SU4 736 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 ZNF559Q9BR84 538 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 SARGQ9BW04 601 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 DDX47Q9H0S4 455 aaKnown RBP9.24□□□□□ -0.93
ACTN1-208ENST00000553370 DEFB127Q9H1M4 99 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 KLHL31Q9H511 634 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 ADAP2Q9NPF8 381 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 WWOXQ9NZC7 414 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 TXNDC16Q9P2K2 825 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 YARS2Q9Y2Z4 477 aaKnown RBP9.24□□□□□ -0.93
ACTN1-208ENST00000553370 NEU2Q9Y3R4 380 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 ASB1Q9Y576 335 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 SPACA6W5XKT8 324 aa9.24□□□□□ -0.93
ACTN1-208ENST00000553370 EXPH5Q8NEV8 1989 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 FAM95CA0A1B0GW59 222 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 CDC7O00311 574 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 DNAJB6O75190 326 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 OR2J2O76002 312 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 COX7A2P14406 83 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 EPB42P16452 691 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 ZNF37AP17032 561 aaPredicted RBP9.23□□□□□ -0.93
ACTN1-208ENST00000553370 GABRB3P28472 473 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 ELK3P41970 407 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 PGGT1BP53609 377 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 PLA2G16P53816 162 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 ARL4CP56559 192 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 HSD17B7P56937 341 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 RAB38P57729 211 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 PPIAP62937 165 aaKnown RBP9.23□□□□□ -0.93
ACTN1-208ENST00000553370 TIAL1Q01085 375 aaKnown RBP eCLIP9.23□□□□□ -0.93
ACTN1-208ENST00000553370 ARSJQ5FYB0 599 aaPredicted RBP9.23□□□□□ -0.93
ACTN1-208ENST00000553370 TEDDM1Q5T9Z0 273 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 TMIGD1Q6UXZ0 262 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 HSDL2Q6YN16 418 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 ACAD11Q709F0 780 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 GALNT7Q86SF2 657 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms