RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 RAI14Q9P0K7 980 aa5.22□□□□□ -1.57
SCFD1-208ENST00000553278 ATP6V1HQ9UI12 483 aa5.22□□□□□ -1.57
SCFD1-208ENST00000553278 ING1Q9UK53 422 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-208ENST00000553278 PILRBQ9UKJ0 227 aa5.22□□□□□ -1.57
SCFD1-208ENST00000553278 SATB2Q9UPW6 733 aa5.22□□□□□ -1.57
SCFD1-208ENST00000553278 WDR33Q9C0J8 1336 aaKnown RBP5.22□□□□□ -1.57
SCFD1-208ENST00000553278 RAD54L2Q9Y4B4 1467 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 ZSCAN5CA6NGD5 496 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-208ENST00000553278 XPO1O14980 1071 aaKnown RBP5.21□□□□□ -1.58
SCFD1-208ENST00000553278 ARPC1BO15143 372 aaKnown RBP5.21□□□□□ -1.58
SCFD1-208ENST00000553278 ATP6V0E1O15342 81 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 NUDT21O43809 227 aaKnown RBP5.21□□□□□ -1.58
SCFD1-208ENST00000553278 ZNF821O75541 412 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-208ENST00000553278 TXNDC12O95881 172 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 CA3P07451 260 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 CLUP10909 449 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 RPA2P15927 270 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 ATP6V1C1P21283 382 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 IL4RP24394 825 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 ACKR3P25106 362 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 DPP4P27487 766 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 HTR2AP28223 471 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 ACVRL1P37023 503 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 HOXA1P49639 335 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-208ENST00000553278 CCR4P51679 360 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 METAP1P53582 386 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 SP3Q02447 781 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 HSPA14Q0VDF9 509 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 FUT7Q11130 342 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 SNTA1Q13424 505 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 GRB14Q14449 540 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 SQLEQ14534 574 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 EXOSC7Q15024 291 aaKnown RBP5.21□□□□□ -1.58
SCFD1-208ENST00000553278 CCDC152Q4G0S7 254 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 NCR3LG1Q68D85 454 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 ARHGAP17Q68EM7 881 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 RTL6Q6ICC9 239 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 TCEAL6Q6IPX3 200 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-208ENST00000553278 PRIMA1Q86XR5 153 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 ZC3H3Q8IXZ2 948 aaKnown RBP5.21□□□□□ -1.58
SCFD1-208ENST00000553278 GCNT2Q8N0V5 402 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 ELMOD1Q8N336 334 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 TMEM45BQ96B21 275 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 ZNF583Q96ND8 569 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 AGPAT1Q99943 283 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 SLC26A1Q9H2B4 701 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 ZNF665Q9H7R5 613 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 VPS37BQ9H9H4 285 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 EBF2Q9HAK2 575 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 ZNF319Q9P2F9 582 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 ATG4BQ9Y4P1 393 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 ASB3Q9Y575 518 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 MAB21L2Q9Y586 359 aa5.21□□□□□ -1.58
SCFD1-208ENST00000553278 IGHV4OR15-8A0A075B7B6 117 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 A8MUI8 341 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 K7EQM0 130 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 OVOL3O00110 214 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 FPGTO14772 594 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 PPEF2O14830 753 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 EPHB6O15197 1021 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 GLRA3O75311 464 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 KRT33AO76009 404 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 NR3C1P04150 777 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 HMBSP08397 361 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 FCGR1AP12314 374 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 GP9P14770 177 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 CTNNA2P26232 953 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 PPP2R1AP30153 589 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 ABCG1P45844 678 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 ACADSBP45954 432 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 DHPSP49366 369 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-208ENST00000553278 MRPL28Q13084 256 aaKnown RBP5.2□□□□□ -1.58
SCFD1-208ENST00000553278 RFTN1Q14699 578 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-208ENST00000553278 LRRC37A5PQ49AS3 106 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 FILIP1LQ4L180 1135 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 LIPKQ5VXJ0 399 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 OR4C11Q6IEV9 310 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 LRRC70Q7Z2Q7 622 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 TRMT1LQ7Z2T5 733 aaKnown RBP5.2□□□□□ -1.58
SCFD1-208ENST00000553278 ERASQ7Z444 233 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 TRMT11Q7Z4G4 463 aaKnown RBP5.2□□□□□ -1.58
SCFD1-208ENST00000553278 C5orf24Q7Z6I8 188 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 ZNF679Q8IYX0 411 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 GPC2Q8N158 579 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 CCDC185Q8N715 623 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 SLC37A3Q8NCC5 494 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 CCDC197Q8NCU1 140 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 STEAP2Q8NFT2 490 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 SLC35C1Q96A29 364 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 ZNF274Q96GC6 653 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-208ENST00000553278 ZNF607Q96SK3 696 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 RHNO1Q9BSD3 238 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 MRPL13Q9BYD1 178 aaKnown RBP5.2□□□□□ -1.58
SCFD1-208ENST00000553278 SHARPINQ9H0F6 387 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 GAREM1Q9H706 876 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 POLKQ9UBT6 870 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 PRDM4Q9UKN5 801 aa5.2□□□□□ -1.58
SCFD1-208ENST00000553278 ZNF490Q9ULM2 529 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-208ENST00000553278 OR1A2Q9Y585 309 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms