RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 NCOR1O75376 2440 aa18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 A0A1W2PR48 441 aa18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 DHRS12A0PJE2 317 aa18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 CASQ2O14958 399 aaPredicted RBP18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 PCBP4P57723 403 aaKnown RBP18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 BTN3A2P78410 334 aa18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 BIRC2Q13490 618 aa18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 C6orf132Q5T0Z8 1188 aa18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 CAMKVQ8NCB2 501 aa18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 PKP2Q99959 881 aa18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 ARMC1Q9NVT9 282 aa18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 EHD3Q9NZN3 535 aa18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 PCDHGB4Q9UN71 923 aa18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 MYO15AQ9UKN7 3530 aa18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 CACNA1EQ15878 2313 aa18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 TMEM221A6NGB7 291 aa18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 M0R296 226 aa18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 HCRTR1O43613 425 aa18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 CYP51A1Q16850 503 aa18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 NATD1Q8N6N6 113 aa18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 PNPT1Q8TCS8 783 aaKnown RBP18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 RERGQ96A58 199 aaPredicted RBP18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 NSMCE2Q96MF7 247 aa18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 IL21RQ9HBE5 538 aa18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 GPATCH2Q9NW75 528 aa18.55■□□□□ 0.56
RBFOX1-215ENST00000553186 WASHC1A8K0Z3 465 aa18.54■□□□□ 0.56
RBFOX1-215ENST00000553186 KCNK5O95279 499 aa18.54■□□□□ 0.56
RBFOX1-215ENST00000553186 CDH3P22223 829 aa18.54■□□□□ 0.56
RBFOX1-215ENST00000553186 MVDP53602 400 aa18.54■□□□□ 0.56
RBFOX1-215ENST00000553186 FIG4Q92562 907 aa18.54■□□□□ 0.56
RBFOX1-215ENST00000553186 FAIM2Q9BWQ8 316 aa18.54■□□□□ 0.56
RBFOX1-215ENST00000553186 CHST8Q9H2A9 424 aa18.54■□□□□ 0.56
RBFOX1-215ENST00000553186 RNF215Q9Y6U7 377 aa18.54■□□□□ 0.56
RBFOX1-215ENST00000553186 VPS13AQ96RL7 3174 aa18.54■□□□□ 0.56
RBFOX1-215ENST00000553186 PRKRAO75569 313 aaKnown RBP18.54■□□□□ 0.56
RBFOX1-215ENST00000553186 GPIP06744 558 aa18.54■□□□□ 0.56
RBFOX1-215ENST00000553186 PPIBP23284 216 aaKnown RBP18.54■□□□□ 0.56
RBFOX1-215ENST00000553186 ARRB1P49407 418 aaPredicted RBP18.54■□□□□ 0.56
RBFOX1-215ENST00000553186 POLE2P56282 527 aa18.54■□□□□ 0.56
RBFOX1-215ENST00000553186 ADRM1Q16186 407 aa18.54■□□□□ 0.56
RBFOX1-215ENST00000553186 IRGCQ6NXR0 463 aa18.54■□□□□ 0.56
RBFOX1-215ENST00000553186 C19orf47Q8N9M1 422 aaKnown RBP18.54■□□□□ 0.56
RBFOX1-215ENST00000553186 TMEM102Q8N9M5 508 aaPredicted RBP18.54■□□□□ 0.56
RBFOX1-215ENST00000553186 EXOSC8Q96B26 276 aaKnown RBP18.54■□□□□ 0.56
RBFOX1-215ENST00000553186 MAP3K3Q99759 626 aa18.54■□□□□ 0.56
RBFOX1-215ENST00000553186 SLC9B1P1A6NJY1 282 aa18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 CXCR6O00574 342 aa18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 PDPK1O15530 556 aa18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 ZSCAN9O15535 394 aaPredicted RBP18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 PROM1O43490 865 aa18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 GUCY1B2O75343 617 aa18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 AIFM1O95831 613 aa18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 DDX5P17844 614 aaKnown RBP18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 PSMA4P25789 261 aaKnown RBP18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 PEX2P28328 305 aa18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 RGNQ15493 299 aa18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 MANEAQ5SRI9 462 aa18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 LPCAT4Q643R3 524 aa18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 C18orf63Q68DL7 685 aa18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 KBTBD2Q8IY47 623 aa18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 SLC35F3Q8IY50 421 aa18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 ARL10Q8N8L6 244 aa18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 OR52E4Q8NGH9 312 aa18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 ZCCHC10Q8TBK6 192 aa18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 SLC35A5Q9BS91 424 aa18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 C1GALT1Q9NS00 363 aa18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 LRIT1Q9P2V4 623 aa18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 SUSD2Q9UGT4 822 aa18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 FBXW2Q9UKT8 454 aa18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 AURKCQ9UQB9 309 aa18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 C15orf41Q9Y2V0 281 aa18.53■□□□□ 0.56
RBFOX1-215ENST00000553186 URADA6NGE7 173 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 RHPN2P1A8MT19 583 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 PGRMC2O15173 223 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 GSTA4O15217 222 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 NUDT21O43809 227 aaKnown RBP18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 NTRK1P04629 796 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 EIF2S1P05198 315 aaKnown RBP18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 UMPSP11172 480 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 EPHA4P54764 986 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 SUZ12Q15022 739 aaKnown RBP18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 TRIP10Q15642 601 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 DEFB134Q4QY38 66 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 CPZQ66K79 652 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 TMEM214Q6NUQ4 689 aaKnown RBP18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 PTOV1Q86YD1 416 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 TMEM126BQ8IUX1 230 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 TRIML2Q8N7C3 387 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 OR5P2Q8WZ92 322 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 MAPKAP1Q9BPZ7 522 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 CES1P1Q9UKY3 287 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 MRPS2Q9Y399 296 aaKnown RBP18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 LRRC42Q9Y546 428 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 CABIN1Q9Y6J0 2220 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 GLOD5A6NK44 160 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 KIF1CO43896 1103 aaKnown RBP18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 CAPNS1P04632 268 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 MTX3Q5HYI7 312 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 ZCCHC8Q6NZY4 707 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms