RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 FADDQ13158 208 aa11.95□□□□□ -0.5
CACNB3-217ENST00000550483 ZCCHC8Q6NZY4 707 aaKnown RBP11.95□□□□□ -0.5
CACNB3-217ENST00000550483 TSSK4Q6SA08 328 aa11.95□□□□□ -0.5
CACNB3-217ENST00000550483 CEP68Q76N32 757 aa11.95□□□□□ -0.5
CACNB3-217ENST00000550483 UBE3DQ7Z6J8 389 aa11.95□□□□□ -0.5
CACNB3-217ENST00000550483 CALHM3Q86XJ0 350 aa11.95□□□□□ -0.5
CACNB3-217ENST00000550483 TICAM1Q8IUC6 712 aa11.95□□□□□ -0.5
CACNB3-217ENST00000550483 PLD3Q8IV08 490 aa11.95□□□□□ -0.5
CACNB3-217ENST00000550483 SLC30A8Q8IWU4 369 aa11.95□□□□□ -0.5
CACNB3-217ENST00000550483 MSRB3Q8IXL7 192 aa11.95□□□□□ -0.5
CACNB3-217ENST00000550483 EFCAB3Q8N7B9 438 aa11.95□□□□□ -0.5
CACNB3-217ENST00000550483 ACOT4Q8N9L9 421 aa11.95□□□□□ -0.5
CACNB3-217ENST00000550483 C19orf47Q8N9M1 422 aaKnown RBP11.95□□□□□ -0.5
CACNB3-217ENST00000550483 CATSPER1Q8NEC5 780 aa11.95□□□□□ -0.5
CACNB3-217ENST00000550483 OR4A15Q8NGL6 344 aa11.95□□□□□ -0.5
CACNB3-217ENST00000550483 SLC45A3Q96JT2 553 aa11.95□□□□□ -0.5
CACNB3-217ENST00000550483 NSMCE2Q96MF7 247 aa11.95□□□□□ -0.5
CACNB3-217ENST00000550483 CCDC3Q9BQI4 270 aa11.95□□□□□ -0.5
CACNB3-217ENST00000550483 NPLQ9BXD5 320 aaPredicted RBP11.95□□□□□ -0.5
CACNB3-217ENST00000550483 YY1AP1Q9H869 796 aa11.95□□□□□ -0.5
CACNB3-217ENST00000550483 LYRM4Q9HD34 91 aa11.95□□□□□ -0.5
CACNB3-217ENST00000550483 LHX9Q9NQ69 397 aa11.95□□□□□ -0.5
CACNB3-217ENST00000550483 EVA1BQ9NVM1 165 aa11.95□□□□□ -0.5
CACNB3-217ENST00000550483 ARMC1Q9NVT9 282 aa11.95□□□□□ -0.5
CACNB3-217ENST00000550483 THUMPD1Q9NXG2 353 aaKnown RBP11.95□□□□□ -0.5
CACNB3-217ENST00000550483 SLC25A37Q9NYZ2 338 aa11.95□□□□□ -0.5
CACNB3-217ENST00000550483 EXO1Q9UQ84 846 aaKnown RBP11.95□□□□□ -0.5
CACNB3-217ENST00000550483 NEUROG3Q9Y4Z2 214 aa11.95□□□□□ -0.5
CACNB3-217ENST00000550483 SLC22A7Q9Y694 548 aa11.95□□□□□ -0.5
CACNB3-217ENST00000550483 CNOT1A5YKK6 2376 aaKnown RBP11.94□□□□□ -0.5
CACNB3-217ENST00000550483 FRYQ5TBA9 3013 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 A0A1B0GTQ1 180 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 BLACEA4D250 179 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 PPM1DO15297 605 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 DUX1O43812 170 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 B3GALT2O43825 422 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 RETP07949 1114 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 SMIM10L1P0DMW3 83 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 IL1RNP18510 177 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 GGT1P19440 569 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 IL10P22301 178 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 EPHA8P29322 1005 aaPredicted RBP11.94□□□□□ -0.5
CACNB3-217ENST00000550483 EMP3P54852 163 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 POLE2P56282 527 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 VEZF1Q14119 521 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 NDUFA9Q16795 377 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 DEFB133Q30KQ1 61 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 GARNL3Q5VVW2 1013 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 CPZQ66K79 652 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 BHLHB9Q6PI77 547 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 ZNF621Q6ZSS3 439 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 FKBP9P1Q75LS8 142 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 TRIM73Q86UV7 250 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 ANKRD46Q86W74 232 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 KMT5CQ86Y97 462 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 PLXDC1Q8IUK5 500 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 MICU2Q8IYU8 434 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 EID3Q8N140 333 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 PQLC1Q8N2U9 271 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 ADAMTS18Q8TE60 1221 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 UTP15Q8TED0 518 aaKnown RBP11.94□□□□□ -0.5
CACNB3-217ENST00000550483 MOAP1Q96BY2 351 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 SMIM10Q96HG1 83 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 ZNF583Q96ND8 569 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 TRAPPC9Q96Q05 1148 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 TEFMQ96QE5 360 aaKnown RBP11.94□□□□□ -0.5
CACNB3-217ENST00000550483 DPYSL5Q9BPU6 564 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 PCDHAC1Q9H158 963 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 TPT1P8Q9HAU6 139 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 AP4S1Q9Y587 144 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 SNX11Q9Y5W9 270 aa11.94□□□□□ -0.5
CACNB3-217ENST00000550483 FANCMQ8IYD8 2048 aa11.93□□□□□ -0.5
CACNB3-217ENST00000550483 A0A0J9YVX5 310 aa11.93□□□□□ -0.5
CACNB3-217ENST00000550483 DHRS12A0PJE2 317 aa11.93□□□□□ -0.5
CACNB3-217ENST00000550483 RTCAO00442 366 aaKnown RBP11.93□□□□□ -0.5
CACNB3-217ENST00000550483 CASQ2O14958 399 aaPredicted RBP11.93□□□□□ -0.5
CACNB3-217ENST00000550483 HNRNPRO43390 633 aaKnown RBP11.93□□□□□ -0.5
CACNB3-217ENST00000550483 TMPRSS11DO60235 418 aa11.93□□□□□ -0.5
CACNB3-217ENST00000550483 CTSVO60911 334 aa11.93□□□□□ -0.5
CACNB3-217ENST00000550483 SORBS2O94875 1100 aaKnown RBP11.93□□□□□ -0.5
CACNB3-217ENST00000550483 KLHL18O94889 574 aa11.93□□□□□ -0.5
CACNB3-217ENST00000550483 CPSF4O95639 269 aaKnown RBP11.93□□□□□ -0.5
CACNB3-217ENST00000550483 CER1O95813 267 aa11.93□□□□□ -0.5
CACNB3-217ENST00000550483 BAG2O95816 211 aa11.93□□□□□ -0.5
CACNB3-217ENST00000550483 IFI6P09912 130 aa11.93□□□□□ -0.5
CACNB3-217ENST00000550483 ALOX12P18054 663 aa11.93□□□□□ -0.5
CACNB3-217ENST00000550483 UQCRC2P22695 453 aa11.93□□□□□ -0.5
CACNB3-217ENST00000550483 PTDSS1P48651 473 aaKnown RBP11.93□□□□□ -0.5
CACNB3-217ENST00000550483 ANXA11P50995 505 aaKnown RBP11.93□□□□□ -0.5
CACNB3-217ENST00000550483 MRPS22P82650 360 aaKnown RBP11.93□□□□□ -0.5
CACNB3-217ENST00000550483 RBBP4Q09028 425 aa11.93□□□□□ -0.5
CACNB3-217ENST00000550483 SLAMF1Q13291 335 aa11.93□□□□□ -0.5
CACNB3-217ENST00000550483 CLPPQ16740 277 aaPredicted RBP11.93□□□□□ -0.5
CACNB3-217ENST00000550483 TCTE1Q5JU00 501 aa11.93□□□□□ -0.5
CACNB3-217ENST00000550483 NDUFAF5Q5TEU4 345 aa11.93□□□□□ -0.5
CACNB3-217ENST00000550483 GLYATQ6IB77 296 aa11.93□□□□□ -0.5
CACNB3-217ENST00000550483 DNAJC14Q6Y2X3 702 aaPredicted RBP11.93□□□□□ -0.5
CACNB3-217ENST00000550483 LRRC74BQ6ZQY2 392 aa11.93□□□□□ -0.5
CACNB3-217ENST00000550483 IFNEQ86WN2 208 aa11.93□□□□□ -0.5
CACNB3-217ENST00000550483 FAM20CQ8IXL6 584 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms