RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 NXPE4Q6UWF7 544 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 FGD2Q7Z6J4 655 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 CTAGE6Q86UF2 777 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 THOC6Q86W42 341 aaKnown RBP7.11□□□□□ -1.27
NEK3-201ENST00000550331 IGDCC3Q8IVU1 814 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 CEP97Q8IW35 865 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 SCUBE1Q8IWY4 988 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 PDIK1LQ8N165 341 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 CA13Q8N1Q1 262 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 ZFP62Q8NB50 900 aaPredicted RBP7.11□□□□□ -1.27
NEK3-201ENST00000550331 TTLQ8NG68 377 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 FAM57AQ8TBR7 257 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 CREB3L4Q8TEY5 395 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 CA5BP1Q8WTZ4 195 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 GAL3ST3Q96A11 431 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 LRRC39Q96DD0 335 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 VMP1Q96GC9 406 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 SEC16BQ96JE7 1060 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 TREX2Q9BQ50 279 aaPredicted RBP7.11□□□□□ -1.27
NEK3-201ENST00000550331 NPLQ9BXD5 320 aaPredicted RBP7.11□□□□□ -1.27
NEK3-201ENST00000550331 ENKD1Q9H0I2 346 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 PLAC1Q9HBJ0 212 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 NECTIN3Q9NQS3 549 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 COQ3Q9NZJ6 369 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 ZFATQ9P243 1243 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 SLC17A6Q9P2U8 582 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 IKZF3Q9UKT9 509 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 PPT2Q9UMR5 302 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 SNX12Q9UMY4 172 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 SLC22A14Q9Y267 594 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 GTF3C1Q12789 2109 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 A0A088AWK7 358 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 TRBV11-1A0A0K0K1C0 115 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 LRIT2A6NDA9 550 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 C4orf51C9J302 202 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 FANCGO15287 622 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 PEX1O43933 1283 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 H2AFYO75367 372 aaKnown RBP7.1□□□□□ -1.27
NEK3-201ENST00000550331 ITGA10O75578 1167 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 MYO1DO94832 1006 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 ZNF10P21506 573 aaPredicted RBP7.1□□□□□ -1.27
NEK3-201ENST00000550331 IVDP26440 423 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 HPDP32754 393 aaPredicted RBP7.1□□□□□ -1.27
NEK3-201ENST00000550331 PTGER1P34995 402 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 HNF4AP41235 474 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 MEOX1P50221 254 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 PGGT1BP53609 377 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 HSD17B7P56937 341 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 ILF2Q12905 390 aaKnown RBP7.1□□□□□ -1.27
NEK3-201ENST00000550331 RBBP5Q15291 538 aaKnown RBP7.1□□□□□ -1.27
NEK3-201ENST00000550331 CMPK2Q5EBM0 449 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 TOR1AIP1Q5JTV8 583 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 STEAP4Q687X5 459 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 TRMT10BQ6PF06 316 aaKnown RBP7.1□□□□□ -1.27
NEK3-201ENST00000550331 NCCRP1Q6ZVX7 275 aaPredicted RBP7.1□□□□□ -1.27
NEK3-201ENST00000550331 SYDE1Q6ZW31 735 aaPredicted RBP7.1□□□□□ -1.27
NEK3-201ENST00000550331 ADAMTSL2Q86TH1 951 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 SULF2Q8IWU5 870 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 GPALPP1Q8IXQ4 340 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.1□□□□□ -1.27
NEK3-201ENST00000550331 KLHDC8AQ8IYD2 350 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 CYP4Z2PQ8N1L4 340 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 NKAPQ8N5F7 415 aaKnown RBP7.1□□□□□ -1.27
NEK3-201ENST00000550331 TMEM156Q8N614 296 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 TP53INP1Q96A56 240 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 SDCCAG3Q96C92 435 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 CFAP36Q96G28 342 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 PDLIM2Q96JY6 352 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 EGFL8Q99944 293 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 WDR83Q9BRX9 315 aaKnown RBP7.1□□□□□ -1.27
NEK3-201ENST00000550331 CAPS2Q9BXY5 557 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 PITHD1Q9GZP4 211 aaPredicted RBP7.1□□□□□ -1.27
NEK3-201ENST00000550331 DDX47Q9H0S4 455 aaKnown RBP7.1□□□□□ -1.27
NEK3-201ENST00000550331 KLHL31Q9H511 634 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 MCCC2Q9HCC0 563 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 ZNF223Q9UK11 482 aaPredicted RBP7.1□□□□□ -1.27
NEK3-201ENST00000550331 CHMP2BQ9UQN3 213 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 MRPS33Q9Y291 106 aaKnown RBP7.1□□□□□ -1.27
NEK3-201ENST00000550331 OARD1Q9Y530 152 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 TEX264Q9Y6I9 313 aa7.1□□□□□ -1.27
NEK3-201ENST00000550331 MAP1AP78559 2803 aaPredicted RBP7.09□□□□□ -1.27
NEK3-201ENST00000550331 A0A1B0GTH9 108 aa7.09□□□□□ -1.27
NEK3-201ENST00000550331 FAM95CA0A1B0GW59 222 aa7.09□□□□□ -1.27
NEK3-201ENST00000550331 NPEPPSL1A6NEC2 478 aa7.09□□□□□ -1.27
NEK3-201ENST00000550331 A8MUA0 341 aa7.09□□□□□ -1.27
NEK3-201ENST00000550331 CDC7O00311 574 aa7.09□□□□□ -1.27
NEK3-201ENST00000550331 CLDN4O14493 209 aa7.09□□□□□ -1.27
NEK3-201ENST00000550331 ERI3O43414 337 aaKnown RBP7.09□□□□□ -1.27
NEK3-201ENST00000550331 B3GALT2O43825 422 aa7.09□□□□□ -1.27
NEK3-201ENST00000550331 HS6ST1O60243 411 aa7.09□□□□□ -1.27
NEK3-201ENST00000550331 CLEC3AO75596 197 aa7.09□□□□□ -1.27
NEK3-201ENST00000550331 WDR47O94967 919 aa7.09□□□□□ -1.27
NEK3-201ENST00000550331 TUBB4AP04350 444 aa7.09□□□□□ -1.27
NEK3-201ENST00000550331 TPOP07202 933 aa7.09□□□□□ -1.27
NEK3-201ENST00000550331 C1GALT1C1LP0DN25 315 aa7.09□□□□□ -1.27
NEK3-201ENST00000550331 CD99P14209 185 aa7.09□□□□□ -1.27
NEK3-201ENST00000550331 TCP1P17987 556 aaKnown RBP7.09□□□□□ -1.27
NEK3-201ENST00000550331 HNRNPH1P31943 449 aaKnown RBP7.09□□□□□ -1.27
NEK3-201ENST00000550331 ELK3P41970 407 aa7.09□□□□□ -1.27
NEK3-201ENST00000550331 SLC6A12P48065 614 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms