RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 OR4K3Q96R72 315 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 GATA5Q9BWX5 397 aaPredicted RBP12.63□□□□□ -0.39
NUP188-211ENST00000550219 PCTPQ9UKL6 214 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 SLC22A14Q9Y267 594 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 CPAMD8Q8IZJ3 1885 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 MDC1Q14676 2089 aaKnown RBP12.62□□□□□ -0.39
NUP188-211ENST00000550219 NBPF19A0A087WUL8 3843 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 TRGV8A0A0C4DH27 118 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 A0A1B0GUH1 482 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 PRSS44E7EML9 344 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 H2AFYO75367 372 aaKnown RBP12.62□□□□□ -0.39
NUP188-211ENST00000550219 UNC5CO95185 931 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 SERPIND1P05546 499 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 STSP08842 583 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 ICAM2P13598 275 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 EPORP19235 508 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 HRH2P25021 359 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 NAGLUP54802 743 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 ANKRD37Q7Z713 158 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 BEST3Q8N1M1 668 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 FAM76AQ8TAV0 307 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 THAP11Q96EK4 314 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 PEX11GQ96HA9 241 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 IMMP1LQ96LU5 166 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 HAUS8Q9BT25 410 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 GSTO2Q9H4Y5 243 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 KCNK13Q9HB14 408 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 ZBTB26Q9HCK0 441 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 INTS9Q9NV88 658 aaKnown RBP12.62□□□□□ -0.39
NUP188-211ENST00000550219 DNAJC11Q9NVH1 559 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 GPRC5BQ9NZH0 403 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 OPTCQ9UBM4 332 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 TEKT2Q9UIF3 430 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 NAALAD2Q9Y3Q0 740 aa12.62□□□□□ -0.39
NUP188-211ENST00000550219 UNC79Q9P2D8 2635 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 NDUFS4O43181 175 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 LCMT2O60294 686 aaKnown RBP12.61□□□□□ -0.39
NUP188-211ENST00000550219 NPHS1O60500 1241 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 CCNT2O60583 730 aaKnown RBP12.61□□□□□ -0.39
NUP188-211ENST00000550219 PRAMEF2O60811 474 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 WDR47O94967 919 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 SERPINE1P05121 402 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 MST1P26927 711 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 SERPINB5P36952 375 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 PIK3CGP48736 1102 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 OLR1P78380 273 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 GTF2H2Q13888 395 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 E2F2Q14209 437 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 PDK4Q16654 411 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 CES4AQ5XG92 561 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 ZNF324BQ6AW86 544 aaPredicted RBP12.61□□□□□ -0.39
NUP188-211ENST00000550219 PLAG1Q6DJT9 500 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 GTF2H2CQ6P1K8 395 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 PAPD4Q6PIY7 484 aaKnown RBP12.61□□□□□ -0.39
NUP188-211ENST00000550219 FRMD7Q6ZUT3 714 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 GOLGA7Q7Z5G4 137 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 PDSS2Q86YH6 399 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 OR5T3Q8NGG3 340 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 RAB3IL1Q8TBN0 382 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 SLC13A3Q8WWT9 602 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 SREK1Q8WXA9 508 aaKnown RBP12.61□□□□□ -0.39
NUP188-211ENST00000550219 TSLPQ969D9 159 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 MOCOSQ96EN8 888 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 NSUN5Q96P11 429 aaKnown RBP12.61□□□□□ -0.39
NUP188-211ENST00000550219 PAIP2Q9BPZ3 127 aaKnown RBP12.61□□□□□ -0.39
NUP188-211ENST00000550219 TRMOQ9BU70 441 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 CAPS2Q9BXY5 557 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 RNF32Q9H0A6 362 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 ANKRD10Q9NXR5 420 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 STMN3Q9NZ72 180 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 ABI3Q9P2A4 366 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 SEC14L3Q9UDX4 400 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 KCNE2Q9Y6J6 123 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 DOPEY1Q5JWR5 2465 aa12.61□□□□□ -0.39
NUP188-211ENST00000550219 HEATR5BQ9P2D3 2071 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 KCNE1BA0A087WTH5 132 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 WDR91A4D1P6 747 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 FAM227AF5H4B4 570 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 KLF11O14901 512 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 OR1F1O43749 312 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 PRAMEF4O60810 478 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 SUPT7LO94864 414 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 B3GALT4O96024 378 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 CRYABP02511 175 aaKnown RBP12.6□□□□□ -0.39
NUP188-211ENST00000550219 EPB42P16452 691 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 GRK2P25098 689 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 CASP2P42575 452 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 CCR8P51685 355 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 CDH13P55290 713 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 CLCQ05315 142 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 ACTN3Q08043 901 aaPredicted RBP12.6□□□□□ -0.39
NUP188-211ENST00000550219 GALNT1Q10472 559 aaPredicted RBP12.6□□□□□ -0.39
NUP188-211ENST00000550219 ABRAXAS2Q15018 415 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 CHI3L2Q15782 390 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 SFT2D3Q587I9 215 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 ZNF766Q5HY98 468 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 PRAMEF9Q5VWM5 478 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 CRLF3Q8IUI8 442 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 TRIM42Q8IWZ5 723 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 TEX9Q8N6V9 391 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms