RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 MTHFD2P13995 350 aa12.52□□□□□ -0.41
GCN1-206ENST00000549815 TFEBP19484 476 aa12.52□□□□□ -0.41
GCN1-206ENST00000549815 ZNF10P21506 573 aaPredicted RBP12.52□□□□□ -0.41
GCN1-206ENST00000549815 CASQ1P31415 396 aa12.52□□□□□ -0.41
GCN1-206ENST00000549815 ETF1P62495 437 aaKnown RBP12.52□□□□□ -0.41
GCN1-206ENST00000549815 CHIT1Q13231 466 aa12.52□□□□□ -0.41
GCN1-206ENST00000549815 LAPTM5Q13571 262 aa12.52□□□□□ -0.41
GCN1-206ENST00000549815 EFTUD2Q15029 972 aaKnown RBP eCLIP12.52□□□□□ -0.41
GCN1-206ENST00000549815 MTFR2Q6P444 385 aa12.52□□□□□ -0.41
GCN1-206ENST00000549815 RPTNQ6XPR3 784 aa12.52□□□□□ -0.41
GCN1-206ENST00000549815 FGD2Q7Z6J4 655 aa12.52□□□□□ -0.41
GCN1-206ENST00000549815 SPPL2CQ8IUH8 684 aa12.52□□□□□ -0.41
GCN1-206ENST00000549815 PPM1NQ8N819 430 aa12.52□□□□□ -0.41
GCN1-206ENST00000549815 SNX31Q8N9S9 440 aa12.52□□□□□ -0.41
GCN1-206ENST00000549815 FAM98AQ8NCA5 519 aaKnown RBP12.52□□□□□ -0.41
GCN1-206ENST00000549815 STAG3L4Q8TBR4 150 aa12.52□□□□□ -0.41
GCN1-206ENST00000549815 ZNF473Q8WTR7 871 aaKnown RBP12.52□□□□□ -0.41
GCN1-206ENST00000549815 UBTD2Q8WUN7 234 aa12.52□□□□□ -0.41
GCN1-206ENST00000549815 NCLNQ969V3 563 aa12.52□□□□□ -0.41
GCN1-206ENST00000549815 MARVELD3Q96A59 401 aa12.52□□□□□ -0.41
GCN1-206ENST00000549815 VMP1Q96GC9 406 aa12.52□□□□□ -0.41
GCN1-206ENST00000549815 F2RL3Q96RI0 385 aa12.52□□□□□ -0.41
GCN1-206ENST00000549815 MS4A8Q9BY19 250 aa12.52□□□□□ -0.41
GCN1-206ENST00000549815 ALG9Q9H6U8 611 aa12.52□□□□□ -0.41
GCN1-206ENST00000549815 PNO1Q9NRX1 252 aaKnown RBP12.52□□□□□ -0.41
GCN1-206ENST00000549815 KCMF1Q9P0J7 381 aa12.52□□□□□ -0.41
GCN1-206ENST00000549815 RNF112Q9ULX5 631 aa12.52□□□□□ -0.41
GCN1-206ENST00000549815 UTP11Q9Y3A2 253 aaKnown RBP12.52□□□□□ -0.41
GCN1-206ENST00000549815 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.52□□□□□ -0.41
GCN1-206ENST00000549815 CSMD2Q7Z408 3487 aa12.52□□□□□ -0.41
GCN1-206ENST00000549815 CREBBPQ92793 2442 aa12.52□□□□□ -0.41
GCN1-206ENST00000549815 ARHGAP10A1A4S6 786 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 HMX2A2RU54 273 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 UBXN8O00124 270 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 CLDN4O14493 209 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 FCHO1O14526 889 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 ZNHIT1O43257 154 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 CTNSO60931 367 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 KERAO60938 352 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 ITGA10O75578 1167 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 SCELO95171 688 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 MLYCDO95822 493 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 HPDP32754 393 aaPredicted RBP12.51□□□□□ -0.41
GCN1-206ENST00000549815 HSF1Q00613 529 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 IRF8Q02556 426 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 SLC13A2Q13183 592 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 NAB1Q13506 487 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 SLMAPQ14BN4 828 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 PAGE2BQ5JRK9 111 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 SYT10Q6XYQ8 523 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 BNC2Q6ZN30 1099 aaPredicted RBP12.51□□□□□ -0.41
GCN1-206ENST00000549815 CLNKQ7Z7G1 428 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 SULF2Q8IWU5 870 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 LAS2Q8IYD9 372 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 EXT2Q93063 718 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 RAB17Q9H0T7 212 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 LYRM4Q9HD34 91 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 ADAP2Q9NPF8 381 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 FBXW2Q9UKT8 454 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 MRPS33Q9Y291 106 aaKnown RBP12.51□□□□□ -0.41
GCN1-206ENST00000549815 MEMO1Q9Y316 297 aa12.51□□□□□ -0.41
GCN1-206ENST00000549815 SYNDIG1LA6NDD5 238 aa12.5□□□□□ -0.41
GCN1-206ENST00000549815 ZFAND5O76080 213 aa12.5□□□□□ -0.41
GCN1-206ENST00000549815 LTA4HP09960 611 aaKnown RBP12.5□□□□□ -0.41
GCN1-206ENST00000549815 ZNF24P17028 368 aa12.5□□□□□ -0.41
GCN1-206ENST00000549815 CRABP2P29373 138 aa12.5□□□□□ -0.41
GCN1-206ENST00000549815 STX2P32856 288 aa12.5□□□□□ -0.41
GCN1-206ENST00000549815 MSH2P43246 934 aa12.5□□□□□ -0.41
GCN1-206ENST00000549815 MEOX1P50221 254 aa12.5□□□□□ -0.41
GCN1-206ENST00000549815 CDSNQ15517 529 aa12.5□□□□□ -0.41
GCN1-206ENST00000549815 ELAVL1Q15717 326 aaKnown RBP12.5□□□□□ -0.41
GCN1-206ENST00000549815 HIST2H2ACQ16777 129 aaPredicted RBP12.5□□□□□ -0.41
GCN1-206ENST00000549815 ZNF630Q2M218 657 aaPredicted RBP12.5□□□□□ -0.41
GCN1-206ENST00000549815 HIST2H2AA3Q6FI13 130 aa12.5□□□□□ -0.41
GCN1-206ENST00000549815 C16orf47Q6ZP98 133 aaPredicted RBP12.5□□□□□ -0.41
GCN1-206ENST00000549815 RAPH1Q70E73 1250 aa12.5□□□□□ -0.41
GCN1-206ENST00000549815 MDGA2Q7Z553 956 aa12.5□□□□□ -0.41
GCN1-206ENST00000549815 CCDC25Q86WR0 208 aa12.5□□□□□ -0.41
GCN1-206ENST00000549815 CENPLQ8N0S6 344 aaPredicted RBP12.5□□□□□ -0.41
GCN1-206ENST00000549815 GHDCQ8N2G8 530 aa12.5□□□□□ -0.41
GCN1-206ENST00000549815 POGLUT1Q8NBL1 392 aa12.5□□□□□ -0.41
GCN1-206ENST00000549815 C16orf52Q8NHV5 167 aa12.5□□□□□ -0.41
GCN1-206ENST00000549815 PTPMT1Q8WUK0 201 aaPredicted RBP12.5□□□□□ -0.41
GCN1-206ENST00000549815 NXNL1Q96CM4 212 aa12.5□□□□□ -0.41
GCN1-206ENST00000549815 MAGED4Q96JG8 741 aa12.5□□□□□ -0.41
GCN1-206ENST00000549815 KCNC2Q96PR1 638 aa12.5□□□□□ -0.41
GCN1-206ENST00000549815 PHF12Q96QT6 1004 aa12.5□□□□□ -0.41
GCN1-206ENST00000549815 MAPKAP1Q9BPZ7 522 aa12.5□□□□□ -0.41
GCN1-206ENST00000549815 TBCDQ9BTW9 1192 aa12.5□□□□□ -0.41
GCN1-206ENST00000549815 NMRAL1Q9HBL8 299 aa12.5□□□□□ -0.41
GCN1-206ENST00000549815 ZDHHC18Q9NUE0 388 aa12.5□□□□□ -0.41
GCN1-206ENST00000549815 VTI1BQ9UEU0 232 aa12.5□□□□□ -0.41
GCN1-206ENST00000549815 KLF13Q9Y2Y9 288 aaPredicted RBP12.5□□□□□ -0.41
GCN1-206ENST00000549815 MYOCOSA0A1B0GUC4 107 aa12.49□□□□□ -0.41
GCN1-206ENST00000549815 ESYT3A0FGR9 886 aa12.49□□□□□ -0.41
GCN1-206ENST00000549815 K7EPI3 171 aa12.49□□□□□ -0.41
GCN1-206ENST00000549815 RTCAO00442 366 aaKnown RBP12.49□□□□□ -0.41
GCN1-206ENST00000549815 ADAM10O14672 748 aa12.49□□□□□ -0.41
GCN1-206ENST00000549815 S100BP04271 92 aaPredicted RBP12.49□□□□□ -0.41
GCN1-206ENST00000549815 AGAP20933 346 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms