RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 TMEM71Q6P5X7 295 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 SPESP1Q6UW49 350 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 ZNF440Q8IYI8 595 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 FADS6Q8N9I5 356 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 ZNF527Q8NB42 609 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 PCYOX1LQ8NBM8 494 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 CCDC54Q8NEL0 328 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 MAFAQ8NHW3 353 aaPredicted RBP4.63□□□□□ -1.67
SCAF11-212ENST00000549162 LRTOMTQ8WZ04 291 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 C19orf60Q96EN9 201 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 C1GALT1C1Q96EU7 318 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 BTBD10Q9BSF8 475 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 LRRC61Q9BV99 259 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 TM9SF3Q9HD45 589 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 SEPT11Q9NVA2 429 aaKnown RBP4.63□□□□□ -1.67
SCAF11-212ENST00000549162 C1orf109Q9NX04 203 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 SMPD4Q9NXE4 827 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 TOR4AQ9NXH8 423 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 SLC17A7Q9P2U7 560 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 ZNF282Q9UDV7 671 aaPredicted RBP4.63□□□□□ -1.67
SCAF11-212ENST00000549162 BCAP29Q9UHQ4 241 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 RAPGEFL1Q9UHV5 662 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 ITGB1BP2Q9UKP3 347 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 ADAMTS6Q9UKP5 1117 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 MKLN1Q9UL63 735 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 ICAM5Q9UMF0 924 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 A0A1W2PRB8 838 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 LRIT2A6NDA9 550 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 ZNF860A6NHJ4 632 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 J3QRE1 110 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 TLR4O00206 839 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 CFLARO15519 480 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 RAF1P04049 648 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 ALDOCP09972 364 aaKnown RBP4.62□□□□□ -1.67
SCAF11-212ENST00000549162 LBPP18428 481 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 NELFEP18615 380 aaKnown RBP4.62□□□□□ -1.67
SCAF11-212ENST00000549162 AGXTP21549 392 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 GDI1P31150 447 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 HOXC12P31275 282 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 HSPA13P48723 471 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 AFF3P51826 1226 aaKnown RBP4.62□□□□□ -1.67
SCAF11-212ENST00000549162 DIO3P55073 304 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 CSNK2BP67870 215 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 BASP1P80723 227 aaKnown RBP4.62□□□□□ -1.67
SCAF11-212ENST00000549162 TNFRSF17Q02223 184 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 EPS8Q12929 822 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 PMS2P11Q13670 270 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 NKG7Q16617 165 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 PGS1Q32NB8 556 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 GKAP1Q5VSY0 366 aaPredicted RBP4.62□□□□□ -1.67
SCAF11-212ENST00000549162 KLHL35Q6PF15 583 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 PAQR3Q6TCH7 311 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 FAM83HQ6ZRV2 1179 aaPredicted RBP4.62□□□□□ -1.67
SCAF11-212ENST00000549162 TMEM26Q6ZUK4 368 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 GPSM1Q86YR5 675 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 SVOPLQ8N434 492 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 PPM1NQ8N819 430 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 SIDT2Q8NBJ9 832 aaKnown RBP4.62□□□□□ -1.67
SCAF11-212ENST00000549162 OR52N2Q8NGI0 321 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 DNAJB14Q8TBM8 379 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 ZFP90Q8TF47 636 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 HASPINQ8TF76 798 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 MS4A6EQ96DS6 147 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 PGLYRP2Q96PD5 576 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 TBC1D17Q9HA65 648 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 MED17Q9NVC6 651 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 MOSPD1Q9UJG1 213 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 C2orf74A8MZ97 194 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 PLK4O00444 970 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 STK16O75716 305 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 DNTTP04053 509 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 TROVE2P10155 538 aaKnown RBP eCLIP4.62□□□□□ -1.67
SCAF11-212ENST00000549162 FCGR1AP12314 374 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 HTR1BP28222 390 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 PSMD4P55036 377 aaKnown RBP4.62□□□□□ -1.67
SCAF11-212ENST00000549162 STX5Q13190 355 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 TAF12Q16514 161 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 BCL2A1Q16548 175 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 KCNMB1Q16558 191 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 PCK2Q16822 640 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 KLHL26Q53HC5 615 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 KHDRBS2Q5VWX1 349 aaKnown RBP4.62□□□□□ -1.67
SCAF11-212ENST00000549162 SLC48A1Q6P1K1 146 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 COX15Q7KZN9 410 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 ZC3H18Q86VM9 953 aaKnown RBP4.62□□□□□ -1.67
SCAF11-212ENST00000549162 C10orf107Q8IVU9 208 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 SLC25A41Q8N5S1 370 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 CATSPER1Q8NEC5 780 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 MCOLN3Q8TDD5 553 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 GTF2H4Q92759 462 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 NXNL1Q96CM4 212 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 VMP1Q96GC9 406 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 SCMH1Q96GD3 660 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 ZNF597Q96LX8 424 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 FOPNLQ96NB1 174 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 TRAPPC9Q96Q05 1148 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 GPR87Q9BY21 358 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 AMBRA1Q9C0C7 1298 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 HOXD1Q9GZZ0 328 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 IGFLR1Q9H665 355 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms