RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 NKX3-2P78367 333 aa22.12■■□□□ 1.13
NPAS3-206ENST00000548645 RAE1P78406 368 aaKnown RBP22.12■■□□□ 1.13
NPAS3-206ENST00000548645 FOXD4Q12950 439 aaPredicted RBP22.12■■□□□ 1.13
NPAS3-206ENST00000548645 HNRNPA0Q13151 305 aaKnown RBP22.12■■□□□ 1.13
NPAS3-206ENST00000548645 LCN1P1Q5VSP4 162 aa22.12■■□□□ 1.13
NPAS3-206ENST00000548645 ZNF852Q6ZMS4 543 aa22.12■■□□□ 1.13
NPAS3-206ENST00000548645 C11orf74Q86VG3 221 aa22.12■■□□□ 1.13
NPAS3-206ENST00000548645 PHC2Q8IXK0 858 aa22.12■■□□□ 1.13
NPAS3-206ENST00000548645 GPR26Q8NDV2 337 aa22.12■■□□□ 1.13
NPAS3-206ENST00000548645 SLC35A5Q9BS91 424 aa22.12■■□□□ 1.13
NPAS3-206ENST00000548645 RPL36Q9Y3U8 105 aaKnown RBP22.12■■□□□ 1.13
NPAS3-206ENST00000548645 PRAMEF33A0A0G2JMD5 474 aa22.12■■□□□ 1.13
NPAS3-206ENST00000548645 PRAMEF10O60809 474 aa22.12■■□□□ 1.13
NPAS3-206ENST00000548645 HBQ1P09105 142 aa22.12■■□□□ 1.13
NPAS3-206ENST00000548645 PTPN5P54829 565 aa22.12■■□□□ 1.13
NPAS3-206ENST00000548645 CDK6Q00534 326 aa22.12■■□□□ 1.13
NPAS3-206ENST00000548645 GPR19Q15760 415 aa22.12■■□□□ 1.13
NPAS3-206ENST00000548645 CRB2Q5IJ48 1285 aa22.12■■□□□ 1.13
NPAS3-206ENST00000548645 FAM109AQ8N4B1 249 aa22.12■■□□□ 1.13
NPAS3-206ENST00000548645 PRRG3Q9BZD7 231 aa22.12■■□□□ 1.13
NPAS3-206ENST00000548645 DNAJC27Q9NZQ0 273 aa22.12■■□□□ 1.13
NPAS3-206ENST00000548645 A0A1W2PQ67 120 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 C2orf78A6NCI8 922 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 GFYI3L273 518 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 K7ERQ8 282 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 POLR1CO15160 346 aaPredicted RBP22.11■■□□□ 1.13
NPAS3-206ENST00000548645 PLA2G10O15496 165 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 EOMESO95936 686 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 C1SP09871 688 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 IRF1P10914 325 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 GPC1P35052 558 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 HOXC5Q00444 222 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 TNK1Q13470 666 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.11■■□□□ 1.13
NPAS3-206ENST00000548645 TMEM201Q5SNT2 666 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 LIPKQ5VXJ0 399 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 FAM92BQ6ZTR7 304 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 ARHGAP39Q9C0H5 1083 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 MKRN2Q9H000 416 aaKnown RBP22.11■■□□□ 1.13
NPAS3-206ENST00000548645 BRF2Q9HAW0 419 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 DNAH12Q6ZR08 3092 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 VWA8A3KMH1 1905 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 DSPPQ9NZW4 1301 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 AP2A2O94973 939 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 B4GALNT1Q00973 533 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 RNLSQ5VYX0 342 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 TRIM40Q6P9F5 258 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 CCDC28AQ8IWP9 274 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 UBE2J2Q8N2K1 259 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 OXR1Q8N573 874 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 GOT1L1Q8NHS2 421 aaPredicted RBP22.11■■□□□ 1.13
NPAS3-206ENST00000548645 DEDD2Q8WXF8 326 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 BHLHE41Q9C0J9 482 aaPredicted RBP22.11■■□□□ 1.13
NPAS3-206ENST00000548645 TXNL4BQ9NX01 149 aaKnown RBP22.11■■□□□ 1.13
NPAS3-206ENST00000548645 SNX11Q9Y5W9 270 aa22.11■■□□□ 1.13
NPAS3-206ENST00000548645 A0A0X1KG70 313 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 GNG14A0A1W2PPG7 69 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 MYL12BO14950 172 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 IFNA8P32881 189 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 HBA1P69905 142 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 DOC2AQ14183 400 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 WDR45BQ5MNZ6 344 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 VRK3Q8IV63 474 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 PLEKHB1Q9UF11 243 aaPredicted RBP22.1■■□□□ 1.13
NPAS3-206ENST00000548645 SCN8AQ9UQD0 1980 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 ZNF106Q9H2Y7 1883 aaKnown RBP22.1■■□□□ 1.13
NPAS3-206ENST00000548645 C1QBP02746 253 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 IFNW1P05000 195 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 SRCP12931 536 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 ALAS2P22557 587 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 DGKEP52429 567 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 MBTPS1Q14703 1052 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 TATDN3Q17R31 274 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 ZNF630Q2M218 657 aaPredicted RBP22.1■■□□□ 1.13
NPAS3-206ENST00000548645 ZNF770Q6IQ21 691 aaPredicted RBP22.1■■□□□ 1.13
NPAS3-206ENST00000548645 PAMR1Q6UXH9 720 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 RSPO2Q6UXX9 243 aaPredicted RBP22.1■■□□□ 1.13
NPAS3-206ENST00000548645 ZNF767PQ75MW2 155 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 OR5H6Q8NGV6 325 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 CXorf40BQ96DE9 158 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 GPR62Q9BZJ7 368 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 C1GALT1Q9NS00 363 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 RHCGQ9UBD6 479 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 TRBC2A0A5B9 178 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 PLD2O14939 933 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 TBL1XO60907 577 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 ADAP00813 363 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 OSMP13725 252 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 SLC9A3P48764 834 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.1■■□□□ 1.13
NPAS3-206ENST00000548645 TSPAN33Q86UF1 283 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 CLIP3Q96DZ5 547 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 PTPN18Q99952 460 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 UCK2Q9BZX2 261 aa22.1■■□□□ 1.13
NPAS3-206ENST00000548645 ZNF840PA6NDX5 716 aa22.09■■□□□ 1.13
NPAS3-206ENST00000548645 ZSCAN5BA6NJL1 495 aa22.09■■□□□ 1.13
NPAS3-206ENST00000548645 H0YIV9 168 aa22.09■■□□□ 1.13
NPAS3-206ENST00000548645 SH3BGRLO75368 114 aa22.09■■□□□ 1.13
NPAS3-206ENST00000548645 MAP2K3P46734 347 aa22.09■■□□□ 1.13
NPAS3-206ENST00000548645 SPIN4Q56A73 249 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms