RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 CSF3RQ99062 836 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 MTERF1Q99551 399 aaKnown RBP10.26□□□□□ -0.77
GCN1-202ENST00000547263 BARD1Q99728 777 aaKnown RBP10.26□□□□□ -0.77
GCN1-202ENST00000547263 YIPF2Q9BWQ6 316 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 RBCK1Q9BYM8 510 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 SLC29A3Q9BZD2 475 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 RNF32Q9H0A6 362 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 OR51B5Q9H339 312 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 BRF2Q9HAW0 419 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 ZBTB20Q9HC78 741 aaPredicted RBP10.26□□□□□ -0.77
GCN1-202ENST00000547263 MMP25Q9NPA2 562 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 SEMA4BQ9NPR2 832 aaPredicted RBP10.26□□□□□ -0.77
GCN1-202ENST00000547263 OXSMQ9NWU1 459 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 ADAM29Q9UKF5 820 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 STK38LQ9Y2H1 464 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 ASB4Q9Y574 426 aa10.26□□□□□ -0.77
GCN1-202ENST00000547263 SHANK1Q9Y566 2161 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 NPIPB8E9PQR5 432 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 RTCAO00442 366 aaKnown RBP10.25□□□□□ -0.77
GCN1-202ENST00000547263 CDK2AP1O14519 115 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 UBFD1O14562 309 aaKnown RBP10.25□□□□□ -0.77
GCN1-202ENST00000547263 TYROBPO43914 113 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 PRMT3O60678 531 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 CTNSO60931 367 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 CDC123O75794 336 aaPredicted RBP10.25□□□□□ -0.77
GCN1-202ENST00000547263 SUPT7LO94864 414 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 OR4F21O95013 312 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 ESRRBO95718 433 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 MLYCDO95822 493 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 ALPPP05187 535 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 CELA2AP08217 269 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 ATXN8OSP0DMR3 200 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 HSD3B1P14060 373 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 ITGA3P26006 1051 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 HSD3B2P26439 372 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 ETV4P43268 484 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 NEK2P51955 445 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 PKNOX1P55347 436 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 SLC26A5P58743 744 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 TBL3Q12788 808 aaKnown RBP10.25□□□□□ -0.77
GCN1-202ENST00000547263 LCP2Q13094 533 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 MFAP5Q13361 173 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 PCLAFQ15004 111 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 NSDHLQ15738 373 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 EXT1Q16394 746 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 SFT2D3Q587I9 215 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 SLC6A19Q695T7 634 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 FAAH2Q6GMR7 532 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 PAPD4Q6PIY7 484 aaKnown RBP10.25□□□□□ -0.77
GCN1-202ENST00000547263 FRMD7Q6ZUT3 714 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 PARP9Q8IXQ6 854 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 LGI4Q8N135 537 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 METTL4Q8N3J2 472 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 AMER2Q8N7J2 671 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 C7orf57Q8NEG2 295 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 AGAP11Q8TF27 550 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 RGMAQ96B86 450 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 THOC3Q96J01 351 aaKnown RBP10.25□□□□□ -0.77
GCN1-202ENST00000547263 SERPINI1Q99574 410 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 NPAS2Q99743 824 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 MAPKAP1Q9BPZ7 522 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 EPN3Q9H201 632 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 SIRT5Q9NXA8 310 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 MS4A12Q9NXJ0 267 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 SENP1Q9P0U3 644 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 G3BP2Q9UN86 482 aaKnown RBP10.25□□□□□ -0.77
GCN1-202ENST00000547263 PLAAQ9Y263 795 aa10.25□□□□□ -0.77
GCN1-202ENST00000547263 IGHV3-20A0A0C4DH32 117 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 CCDC151A5D8V7 595 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 SAGE2PA6NJ88 616 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 A6NL46 340 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 SMIM23A6NLE4 172 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 COPEO14579 308 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 PROM1O43490 865 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 TMPRSS11DO60235 418 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 B4GALT2O60909 372 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 EEDO75530 441 aaKnown RBP10.24□□□□□ -0.77
GCN1-202ENST00000547263 SEC24DO94855 1032 aaPredicted RBP10.24□□□□□ -0.77
GCN1-202ENST00000547263 ENO1P06733 434 aaKnown RBP10.24□□□□□ -0.77
GCN1-202ENST00000547263 ITGAMP11215 1152 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 TSPAN8P19075 237 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 MAOAP21397 527 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 TPP2P29144 1249 aaPredicted RBP10.24□□□□□ -0.77
GCN1-202ENST00000547263 HNRNPH2P55795 449 aaKnown RBP10.24□□□□□ -0.77
GCN1-202ENST00000547263 PHEXP78562 749 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 GALNT1Q10472 559 aaPredicted RBP10.24□□□□□ -0.77
GCN1-202ENST00000547263 RCN2Q14257 317 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 AP5B1Q2VPB7 878 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 NADK2Q4G0N4 442 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 AGAP7PQ5VUJ5 663 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 ISLR2Q6UXK2 745 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 ATG14Q6ZNE5 492 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 GPRIN3Q6ZVF9 776 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 ZNF605Q86T29 641 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 PTRH1Q86Y79 214 aaKnown RBP10.24□□□□□ -0.77
GCN1-202ENST00000547263 C4orf33Q8N1A6 199 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 APCDD1LQ8NCL9 501 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 BRIX1Q8TDN6 353 aaKnown RBP10.24□□□□□ -0.77
GCN1-202ENST00000547263 TRPC4APQ8TEL6 797 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 HAS2Q92819 552 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms