RNA–Protein interactions for RNA: ENST00000546893.5

SLC38A1-204, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 2,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-204ENST00000546893 PRKCDQ05655 676 aa13.18□□□□□ -0.3
SLC38A1-204ENST00000546893 TIMM50Q3ZCQ8 353 aa13.18□□□□□ -0.3
SLC38A1-204ENST00000546893 ATP13A5Q4VNC0 1218 aa13.18□□□□□ -0.3
SLC38A1-204ENST00000546893 TMEM173Q86WV6 379 aaPredicted RBP13.18□□□□□ -0.3
SLC38A1-204ENST00000546893 ZSWIM9Q86XI8 627 aa13.18□□□□□ -0.3
SLC38A1-204ENST00000546893 LIX1LQ8IVB5 337 aa13.18□□□□□ -0.3
SLC38A1-204ENST00000546893 SLAIN1Q8ND83 568 aa13.18□□□□□ -0.3
SLC38A1-204ENST00000546893 WBP2Q969T9 261 aa13.18□□□□□ -0.3
SLC38A1-204ENST00000546893 C11orf24Q96F05 449 aaPredicted RBP13.18□□□□□ -0.3
SLC38A1-204ENST00000546893 C7orf34Q96L11 122 aa13.18□□□□□ -0.3
SLC38A1-204ENST00000546893 IER2Q9BTL4 223 aa13.18□□□□□ -0.3
SLC38A1-204ENST00000546893 FANCFQ9NPI8 374 aa13.18□□□□□ -0.3
SLC38A1-204ENST00000546893 THSD1Q9NS62 852 aa13.18□□□□□ -0.3
SLC38A1-204ENST00000546893 PSORS1C1Q9UIG5 152 aa13.18□□□□□ -0.3
SLC38A1-204ENST00000546893 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.18□□□□□ -0.3
SLC38A1-204ENST00000546893 SLC22A14Q9Y267 594 aa13.18□□□□□ -0.3
SLC38A1-204ENST00000546893 A0A0U1RQS6 177 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 PNMA8CA0A1B0GUJ8 204 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 LINC00862A6NCI5 91 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 PRRG1O14668 218 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 ZNF821O75541 412 aaPredicted RBP13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 FADS2O95864 444 aaKnown RBP13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 ERP29P30040 261 aaKnown RBP13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 IL12RB1P42701 662 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 MAP2K4P45985 399 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 PFN3P60673 137 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 SNRPD2P62316 118 aaKnown RBP13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 SELENOWP63302 87 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 PTSQ03393 145 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 LMAN2Q12907 356 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 MBOAT1Q6ZNC8 495 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 ZNF551Q7Z340 670 aaPredicted RBP13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 RAB43Q86YS6 212 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 PLCZ1Q86YW0 608 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 NPAS3Q8IXF0 933 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 C10orf111Q8N326 155 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 ADAMTS19Q8TE59 1207 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 SKA2Q8WVK7 121 aaPredicted RBP13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 MSANTD3Q96H12 275 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 COL21A1Q96P44 957 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 COPS4Q9BT78 406 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 NXF2Q9GZY0 626 aaKnown RBP13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 NUAK2Q9H093 628 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 SLC25A13Q9UJS0 675 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 FZD4Q9ULV1 537 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 ZNF175Q9Y473 711 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 C1orf226A1L170 272 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 SH3D21A4FU49 640 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 CLCA1A8K7I4 914 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 ZNF197O14709 1029 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 GRM6O15303 877 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 RNGTTO60942 597 aaKnown RBP13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 PSIP1O75475 530 aaKnown RBP13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 WBP4O75554 376 aaKnown RBP13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 SERPINI2O75830 405 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 CATP04040 527 aaKnown RBP13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 HOXD4P09016 255 aaPredicted RBP13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 ACADMP11310 421 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 CTSKP43235 329 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 KCNJ10P78508 379 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 CD83Q01151 205 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 GALEQ14376 348 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 DMC1Q14565 340 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 DEFB115Q30KQ5 88 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 GARNL3Q5VVW2 1013 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 ANKRD34AQ69YU3 496 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 BRAT1Q6PJG6 821 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 PRSS42Q7Z5A4 293 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 CDH24Q86UP0 819 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 MRPS31Q92665 395 aaKnown RBP13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 OPALINQ96PE5 141 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 BBS2Q9BXC9 721 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 HDHD5Q9BXW7 423 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 DCSTAMPQ9H295 470 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 ZC4H2Q9NQZ6 224 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 MRPL17Q9NRX2 175 aaKnown RBP13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 EVA1BQ9NVM1 165 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 C14orf119Q9NWQ9 140 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 SPASTQ9UBP0 616 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 BTBD3Q9Y2F9 522 aa13.17□□□□□ -0.3
SLC38A1-204ENST00000546893 WASH3PC4AMC7 463 aa13.16□□□□□ -0.3
SLC38A1-204ENST00000546893 AIREO43918 545 aa13.16□□□□□ -0.3
SLC38A1-204ENST00000546893 SNX4O95219 450 aa13.16□□□□□ -0.3
SLC38A1-204ENST00000546893 RPLP0P05388 317 aaKnown RBP13.16□□□□□ -0.3
SLC38A1-204ENST00000546893 CDK1P06493 297 aa13.16□□□□□ -0.3
SLC38A1-204ENST00000546893 SRCP12931 536 aa13.16□□□□□ -0.3
SLC38A1-204ENST00000546893 HOXB3P14651 431 aaPredicted RBP13.16□□□□□ -0.3
SLC38A1-204ENST00000546893 TGFBR2P37173 567 aa13.16□□□□□ -0.3
SLC38A1-204ENST00000546893 RFX2P48378 723 aa13.16□□□□□ -0.3
SLC38A1-204ENST00000546893 NOGQ13253 232 aa13.16□□□□□ -0.3
SLC38A1-204ENST00000546893 TNK1Q13470 666 aa13.16□□□□□ -0.3
SLC38A1-204ENST00000546893 DGCR6Q14129 220 aa13.16□□□□□ -0.3
SLC38A1-204ENST00000546893 RGNQ15493 299 aa13.16□□□□□ -0.3
SLC38A1-204ENST00000546893 IQCCQ4KMZ1 466 aa13.16□□□□□ -0.3
SLC38A1-204ENST00000546893 IFI44LQ53G44 452 aa13.16□□□□□ -0.3
SLC38A1-204ENST00000546893 XKR6Q5GH73 641 aa13.16□□□□□ -0.3
SLC38A1-204ENST00000546893 C22orf39Q6P5X5 142 aa13.16□□□□□ -0.3
SLC38A1-204ENST00000546893 CREB3L2Q70SY1 520 aa13.16□□□□□ -0.3
SLC38A1-204ENST00000546893 TMEM150AQ86TG1 271 aa13.16□□□□□ -0.3
SLC38A1-204ENST00000546893 ENTHD1Q8IYW4 607 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms