RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 IGKV3D-11A0A0A0MRZ8 115 aa13.62□□□□□ -0.23
DDX54-203ENST00000546869 A0A0A6YYD5 115 aa13.62□□□□□ -0.23
DDX54-203ENST00000546869 NPIPB8E9PQR5 432 aa13.62□□□□□ -0.23
DDX54-203ENST00000546869 SAP18O00422 153 aaKnown RBP13.62□□□□□ -0.23
DDX54-203ENST00000546869 RTCAO00442 366 aaKnown RBP13.62□□□□□ -0.23
DDX54-203ENST00000546869 ATXN7O15265 892 aaPredicted RBP13.62□□□□□ -0.23
DDX54-203ENST00000546869 PRMT3O60678 531 aa13.62□□□□□ -0.23
DDX54-203ENST00000546869 HPP00738 406 aa13.62□□□□□ -0.23
DDX54-203ENST00000546869 GRK2P25098 689 aa13.62□□□□□ -0.23
DDX54-203ENST00000546869 FOXA1P55317 472 aa13.62□□□□□ -0.23
DDX54-203ENST00000546869 TBL3Q12788 808 aaKnown RBP13.62□□□□□ -0.23
DDX54-203ENST00000546869 BIKQ13323 160 aa13.62□□□□□ -0.23
DDX54-203ENST00000546869 ABRAXAS2Q15018 415 aa13.62□□□□□ -0.23
DDX54-203ENST00000546869 MINDY4Q4G0A6 757 aa13.62□□□□□ -0.23
DDX54-203ENST00000546869 SGO1Q5FBB7 561 aa13.62□□□□□ -0.23
DDX54-203ENST00000546869 ARL13AQ5H913 290 aaPredicted RBP13.62□□□□□ -0.23
DDX54-203ENST00000546869 PCSK4Q6UW60 755 aa13.62□□□□□ -0.23
DDX54-203ENST00000546869 SCUBE1Q8IWY4 988 aa13.62□□□□□ -0.23
DDX54-203ENST00000546869 CLYBLQ8N0X4 340 aa13.62□□□□□ -0.23
DDX54-203ENST00000546869 CHTF18Q8WVB6 975 aa13.62□□□□□ -0.23
DDX54-203ENST00000546869 METTL2AQ96IZ6 378 aaKnown RBP13.62□□□□□ -0.23
DDX54-203ENST00000546869 ATP6V1G3Q96LB4 118 aa13.62□□□□□ -0.23
DDX54-203ENST00000546869 MAPKAP1Q9BPZ7 522 aa13.62□□□□□ -0.23
DDX54-203ENST00000546869 ZNF700Q9H0M5 742 aa13.62□□□□□ -0.23
DDX54-203ENST00000546869 PRM3Q9NNZ6 103 aa13.62□□□□□ -0.23
DDX54-203ENST00000546869 ATP13A2Q9NQ11 1180 aa13.62□□□□□ -0.23
DDX54-203ENST00000546869 LYARQ9NX58 379 aaKnown RBP13.62□□□□□ -0.23
DDX54-203ENST00000546869 PHF11Q9UIL8 331 aa13.62□□□□□ -0.23
DDX54-203ENST00000546869 TIMM22Q9Y584 194 aa13.62□□□□□ -0.23
DDX54-203ENST00000546869 SPACA6W5XKT8 324 aa13.62□□□□□ -0.23
DDX54-203ENST00000546869 IGHV1-45A0A0A0MS14 117 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 TMEM120BA0PK00 339 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 ARGFXA6NJG6 315 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 TMEM114B3SHH9 223 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 FAM227AF5H4B4 570 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 AZIN1O14977 448 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 PROM1O43490 865 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 KLHL41O60662 606 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 B4GALT2O60909 372 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 CTNSO60931 367 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 SH3BGRLO75368 114 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 SERPINE1P05121 402 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 COX6A1P12074 109 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 ICAM2P13598 275 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 POLE2P56282 527 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 TRA2BP62995 288 aaKnown RBP13.61□□□□□ -0.23
DDX54-203ENST00000546869 AIMP2Q13155 320 aaKnown RBP13.61□□□□□ -0.23
DDX54-203ENST00000546869 SLAMF1Q13291 335 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 NSDHLQ15738 373 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 TCHHL1Q5QJ38 904 aaPredicted RBP13.61□□□□□ -0.23
DDX54-203ENST00000546869 KANK2Q63ZY3 851 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 CPEB2Q7Z5Q1 589 aaKnown RBP13.61□□□□□ -0.23
DDX54-203ENST00000546869 ANKRD37Q7Z713 158 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 GPR180Q86V85 440 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 CLEC1AQ8NC01 280 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 ARL8AQ96BM9 186 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 C11orf24Q96F05 449 aaPredicted RBP13.61□□□□□ -0.23
DDX54-203ENST00000546869 PTCHD1Q96NR3 888 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 KCNA7Q96RP8 456 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 ARHGAP9Q9BRR9 750 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 TUBB6Q9BUF5 446 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 MRPL1Q9BYD6 325 aaKnown RBP13.61□□□□□ -0.23
DDX54-203ENST00000546869 ACPTQ9BZG2 426 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 MLXIPLQ9NP71 852 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 TNFRSF12AQ9NP84 129 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 SLC12A4Q9UP95 1085 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 ASB4Q9Y574 426 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 PCDHGB7Q9Y5F8 929 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 PCDHGA9Q9Y5G4 932 aaKnown RBP13.61□□□□□ -0.23
DDX54-203ENST00000546869 CLDN16Q9Y5I7 305 aa13.61□□□□□ -0.23
DDX54-203ENST00000546869 TCRBV16S1A1N1A0A5B0 115 aa13.6□□□□□ -0.23
DDX54-203ENST00000546869 EEDO75530 441 aaKnown RBP13.6□□□□□ -0.23
DDX54-203ENST00000546869 FAM58BPP0C7Q3 252 aa13.6□□□□□ -0.23
DDX54-203ENST00000546869 CPN2P22792 545 aa13.6□□□□□ -0.23
DDX54-203ENST00000546869 PRPH2P23942 346 aa13.6□□□□□ -0.23
DDX54-203ENST00000546869 TPP2P29144 1249 aaPredicted RBP13.6□□□□□ -0.23
DDX54-203ENST00000546869 TLX1P31314 330 aaPredicted RBP13.6□□□□□ -0.23
DDX54-203ENST00000546869 WDR4P57081 412 aaKnown RBP13.6□□□□□ -0.23
DDX54-203ENST00000546869 AP2B1P63010 937 aa13.6□□□□□ -0.23
DDX54-203ENST00000546869 BTG2P78543 158 aa13.6□□□□□ -0.23
DDX54-203ENST00000546869 PCOLCEQ15113 449 aa13.6□□□□□ -0.23
DDX54-203ENST00000546869 UGT3A2Q3SY77 523 aa13.6□□□□□ -0.23
DDX54-203ENST00000546869 SPIN4Q56A73 249 aa13.6□□□□□ -0.23
DDX54-203ENST00000546869 MFSD4BQ5TF39 518 aa13.6□□□□□ -0.23
DDX54-203ENST00000546869 GALNT18Q6P9A2 607 aa13.6□□□□□ -0.23
DDX54-203ENST00000546869 CYP20A1Q6UW02 462 aa13.6□□□□□ -0.23
DDX54-203ENST00000546869 KIRREL3Q8IZU9 778 aa13.6□□□□□ -0.23
DDX54-203ENST00000546869 EXD3Q8N9H8 876 aa13.6□□□□□ -0.23
DDX54-203ENST00000546869 RAB3IL1Q8TBN0 382 aa13.6□□□□□ -0.23
DDX54-203ENST00000546869 TANKQ92844 425 aa13.6□□□□□ -0.23
DDX54-203ENST00000546869 IMMP1LQ96LU5 166 aa13.6□□□□□ -0.23
DDX54-203ENST00000546869 CCT7Q99832 543 aa13.6□□□□□ -0.23
DDX54-203ENST00000546869 SORBS1Q9BX66 1292 aaKnown RBP13.6□□□□□ -0.23
DDX54-203ENST00000546869 PRTFDC1Q9NRG1 225 aa13.6□□□□□ -0.23
DDX54-203ENST00000546869 RIC8BQ9NVN3 520 aa13.6□□□□□ -0.23
DDX54-203ENST00000546869 NKIRAS1Q9NYS0 192 aa13.6□□□□□ -0.23
DDX54-203ENST00000546869 FBXL4Q9UKA2 621 aa13.6□□□□□ -0.23
DDX54-203ENST00000546869 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.6□□□□□ -0.23
DDX54-203ENST00000546869 TRAF6Q9Y4K3 522 aa13.6□□□□□ -0.23
DDX54-203ENST00000546869 CCL27Q9Y4X3 112 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms