RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 C1QAP02745 245 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 SLC35E2BP0CK96 405 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 EPB42P16452 691 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 TNNI3P19429 210 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 CERS1P27544 350 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 PHBP35232 272 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 SSR4P51571 173 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 LIM2P55344 173 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 GUCY2DQ02846 1103 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 STX4Q12846 297 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 BMPR2Q13873 1038 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 SERTAD2Q14140 314 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 ELAVL1Q15717 326 aaKnown RBP8.74□□□□□ -1.01
YBX3-218ENST00000546298 FAM83EQ2M2I3 478 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 FBXO48Q5FWF7 155 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 LCE2DQ5TA82 110 aaPredicted RBP8.74□□□□□ -1.01
YBX3-218ENST00000546298 SP5Q6BEB4 398 aaPredicted RBP8.74□□□□□ -1.01
YBX3-218ENST00000546298 C8orf74Q6P047 294 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 XKRXQ6PP77 449 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 ZDHHC24Q6UX98 284 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 VN1R5Q7Z5H4 357 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 CMC1Q7Z7K0 106 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 MRGPRGQ86SM5 289 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 SPPL2CQ8IUH8 684 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 GPALPP1Q8IXQ4 340 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 GHDCQ8N2G8 530 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 FAM47BQ8NA70 645 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 APCDD1LQ8NCL9 501 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 RHEBL1Q8TAI7 183 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 ZNF473Q8WTR7 871 aaKnown RBP8.74□□□□□ -1.01
YBX3-218ENST00000546298 UBTD2Q8WUN7 234 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 CMTM7Q96FZ5 175 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 FRMD6Q96NE9 622 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 F2RL3Q96RI0 385 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 ATOH8Q96SQ7 321 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 HES7Q9BYE0 225 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 TSPYL1Q9H0U9 437 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 PRDM7Q9NQW5 492 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 MTRF1LQ9UGC7 380 aaKnown RBP8.74□□□□□ -1.01
YBX3-218ENST00000546298 YARS2Q9Y2Z4 477 aaKnown RBP8.74□□□□□ -1.01
YBX3-218ENST00000546298 HIVEP3Q5T1R4 2406 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 DOPEY1Q5JWR5 2465 aa8.74□□□□□ -1.01
YBX3-218ENST00000546298 MAST4O15021 2626 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 PRAMEF4O60810 478 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 ITGA10O75578 1167 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 C2P06681 752 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 PCNAP12004 261 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 COX7A2P14406 83 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 ABOP16442 354 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 CD22P20273 847 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 AGAP20933 346 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 TYK2P29597 1187 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 PIK3CGP48736 1102 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 GPR143P51810 404 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 RAP1GDS1P52306 607 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 PHEXP78562 749 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 BIKQ13323 160 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 E2F2Q14209 437 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 NAA30Q147X3 362 aaPredicted RBP8.73□□□□□ -1.01
YBX3-218ENST00000546298 ACAP2Q15057 778 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 TRADDQ15628 312 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 C3AR1Q16581 482 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 ZNF468Q5VIY5 522 aaPredicted RBP8.73□□□□□ -1.01
YBX3-218ENST00000546298 PRAMEF9Q5VWM5 478 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 KHDRBS2Q5VWX1 349 aaKnown RBP8.73□□□□□ -1.01
YBX3-218ENST00000546298 KLC3Q6P597 504 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 HSDL2Q6YN16 418 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 BNC2Q6ZN30 1099 aaPredicted RBP8.73□□□□□ -1.01
YBX3-218ENST00000546298 Q6ZPB1 254 aaPredicted RBP8.73□□□□□ -1.01
YBX3-218ENST00000546298 CLNKQ7Z7G1 428 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 LAS2Q8IYD9 372 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 CYP4Z2PQ8N1L4 340 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 C17orf53Q8N3J3 647 aaPredicted RBP8.73□□□□□ -1.01
YBX3-218ENST00000546298 ACOT4Q8N9L9 421 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 MORN4Q8NDC4 146 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 OR5L2Q8NGL0 311 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 OR14A16Q8NHC5 309 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 NCLNQ969V3 563 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 NXNL1Q96CM4 212 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 REPS1Q96D71 796 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 CCDC120Q96HB5 630 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 MS4A8Q9BY19 250 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 ALOXE3Q9BYJ1 711 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 CHST11Q9NPF2 352 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 TIMMDC1Q9NPL8 285 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 IGSF5Q9NSI5 407 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 MS4A12Q9NXJ0 267 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 VTI1BQ9UEU0 232 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 SH3BGRL2Q9UJC5 107 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 ERVK-11Q9UQG0 969 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 ZNF835Q9Y2P0 537 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 TSC22D4Q9Y3Q8 395 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 PCDHGA11Q9Y5H2 935 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 TNPO3Q9Y5L0 923 aaKnown RBP8.73□□□□□ -1.01
YBX3-218ENST00000546298 DOCK10Q96BY6 2186 aa8.73□□□□□ -1.01
YBX3-218ENST00000546298 A0A096LPK6 155 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 A8MVJ9 347 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 UBXN8O00124 270 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 PRRG2O14669 202 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 TFECO14948 347 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms