RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 LIM2P55344 173 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 OLR1P78380 273 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 RAE1P78406 368 aaKnown RBP10.17□□□□□ -0.78
PAAF1-216ENST00000546039 MAT1AQ00266 395 aaKnown RBP10.17□□□□□ -0.78
PAAF1-216ENST00000546039 TNFRSF17Q02223 184 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 OCA2Q04671 838 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 EMX2Q04743 252 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 SLAMF1Q13291 335 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 RUNX2Q13950 521 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 COL9A2Q14055 689 aaPredicted RBP10.17□□□□□ -0.78
PAAF1-216ENST00000546039 NCF4Q15080 339 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 SLC9B1Q4ZJI4 515 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 VWA5B1Q5TIE3 1220 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 NXNQ6DKJ4 435 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 CGB2Q6NT52 195 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 NOXRED1Q6NXP6 359 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 LARP4Q71RC2 724 aaKnown RBP eCLIP10.17□□□□□ -0.78
PAAF1-216ENST00000546039 OVCH1Q7RTY7 1134 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 SPATA19Q7Z5L4 167 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 GPR180Q86V85 440 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 FAM9CQ8IZT9 166 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 IL22RA1Q8N6P7 574 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 EFCAB3Q8N7B9 438 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 OR5T3Q8NGG3 340 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 OR51Q1Q8NH59 317 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 CEP70Q8NHQ1 597 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 RFWD2Q8NHY2 731 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 SNIP1Q8TAD8 396 aaKnown RBP10.17□□□□□ -0.78
PAAF1-216ENST00000546039 CT55Q8WUE5 264 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 GATA6Q92908 595 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 NKD1Q969G9 470 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 PEX11GQ96HA9 241 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 MAPKAP1Q9BPZ7 522 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 CCDC28BQ9BUN5 200 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 EBPLQ9BY08 206 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 TGIF2Q9GZN2 237 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 WDR55Q9H6Y2 383 aaPredicted RBP10.17□□□□□ -0.78
PAAF1-216ENST00000546039 WDR41Q9HAD4 459 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 TCF7L2Q9NQB0 619 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 SLC22A11Q9NSA0 550 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 ASIC5Q9NY37 505 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 NOP53Q9NZM5 478 aaKnown RBP10.17□□□□□ -0.78
PAAF1-216ENST00000546039 KLHL14Q9P2G3 628 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 CTSFQ9UBX1 484 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 GIMAP2Q9UG22 337 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 ADAM21Q9UKJ8 722 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 FBXW2Q9UKT8 454 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 EIF3LQ9Y262 564 aaKnown RBP10.17□□□□□ -0.78
PAAF1-216ENST00000546039 PADI2Q9Y2J8 665 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 WBP11Q9Y2W2 641 aaKnown RBP10.17□□□□□ -0.78
PAAF1-216ENST00000546039 NUP214P35658 2090 aaPredicted RBP10.17□□□□□ -0.78
PAAF1-216ENST00000546039 APC2O95996 2303 aa10.17□□□□□ -0.78
PAAF1-216ENST00000546039 AKAP13Q12802 2813 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 WDFY3Q8IZQ1 3526 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 GOLGA8QA0A0J9YX86 632 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 MED19A0JLT2 244 aaPredicted RBP10.16□□□□□ -0.78
PAAF1-216ENST00000546039 GOLGA8OA6NCC3 632 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 GOLGA8NF8WBI6 632 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 SHOX2O60902 331 aaPredicted RBP10.16□□□□□ -0.78
PAAF1-216ENST00000546039 BMP10O95393 424 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 FHP07954 510 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 CYC1P08574 325 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 NR2F6P10588 404 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 BCKDHAP12694 445 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 SDC1P18827 310 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 TCN2P20062 427 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 CPN2P22792 545 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 TLX1P31314 330 aaPredicted RBP10.16□□□□□ -0.78
PAAF1-216ENST00000546039 ASMTP46597 345 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 IDH3AP50213 366 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 HNRNPH2P55795 449 aaKnown RBP10.16□□□□□ -0.78
PAAF1-216ENST00000546039 DNASE1L3Q13609 305 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 SYT16Q17RD7 645 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 RFTN2Q52LD8 501 aaPredicted RBP10.16□□□□□ -0.78
PAAF1-216ENST00000546039 MLIPQ5VWP3 458 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 LCN10Q6JVE6 187 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 MRPL14Q6P1L8 145 aaKnown RBP10.16□□□□□ -0.78
PAAF1-216ENST00000546039 FAM199XQ6PEV8 388 aaPredicted RBP10.16□□□□□ -0.78
PAAF1-216ENST00000546039 IKBIPQ70UQ0 350 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 MED25Q71SY5 747 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 ZC3H7AQ8IWR0 971 aaKnown RBP10.16□□□□□ -0.78
PAAF1-216ENST00000546039 ZNF595Q8IYB9 648 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 STT3BQ8TCJ2 826 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 C16orf78Q8WTQ4 265 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 FGF11Q92914 225 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 KIAA1143Q96AT1 154 aaPredicted RBP10.16□□□□□ -0.78
PAAF1-216ENST00000546039 TBC1D20Q96BZ9 403 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 MIEF2Q96C03 454 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 THOC1Q96FV9 657 aaKnown RBP10.16□□□□□ -0.78
PAAF1-216ENST00000546039 OR52B2Q96RD2 323 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 EFHD1Q9BUP0 239 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 C1orf50Q9BV19 199 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 YIPF2Q9BWQ6 316 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 FAIM2Q9BWQ8 316 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 GPR87Q9BY21 358 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 CCDC86Q9H6F5 360 aaKnown RBP10.16□□□□□ -0.78
PAAF1-216ENST00000546039 AKIRIN1Q9H9L7 192 aaPredicted RBP10.16□□□□□ -0.78
PAAF1-216ENST00000546039 MYNNQ9NPC7 610 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 PRDM9Q9NQV7 894 aa10.16□□□□□ -0.78
PAAF1-216ENST00000546039 KCMF1Q9P0J7 381 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms