RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 C19orf25Q9UFG5 118 aaPredicted RBP13.1□□□□□ -0.31
TSEN54-203ENST00000545228 MAPRE3Q9UPY8 281 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 WBP11Q9Y2W2 641 aaKnown RBP13.1□□□□□ -0.31
TSEN54-203ENST00000545228 DNAJC15Q9Y5T4 150 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 MAU2Q9Y6X3 613 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 A0A1B0GTL3 188 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 ZNF891A8MT65 544 aaPredicted RBP13.09□□□□□ -0.31
TSEN54-203ENST00000545228 SGK494L7N484 410 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 EFSO43281 561 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 ACPPP15309 386 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 ATP5A1P25705 553 aaKnown RBP13.09□□□□□ -0.31
TSEN54-203ENST00000545228 XCR1P46094 333 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 OR1D4P47884 311 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 MAPK12P53778 367 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 OCRLQ01968 901 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 SMU1Q2TAY7 513 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 CCNYL2Q5T2Q4 361 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 MFSD4BQ5TF39 518 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 MRPL14Q6P1L8 145 aaKnown RBP13.09□□□□□ -0.31
TSEN54-203ENST00000545228 ZNF595Q8IYB9 648 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 METTL27Q8N6F8 245 aaPredicted RBP13.09□□□□□ -0.31
TSEN54-203ENST00000545228 ZNF781Q8N8C0 355 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 ENDOVQ8N8Q3 282 aaKnown RBP13.09□□□□□ -0.31
TSEN54-203ENST00000545228 OR2Y1Q8NGV0 311 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 TBC1D20Q96BZ9 403 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 SLC45A3Q96JT2 553 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 ARHGAP9Q9BRR9 750 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 ACPTQ9BZG2 426 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 KLHL31Q9H511 634 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 SYNPO2LQ9H987 977 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 C1orf109Q9NX04 203 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 SIRT5Q9NXA8 310 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 CCDC88CQ9P219 2028 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 ZDHHC2Q9UIJ5 367 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 MCM8Q9UJA3 840 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 DAPP1Q9UN19 280 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 MMACHCQ9Y4U1 282 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 MGAQ8IWI9 3026 aa13.09□□□□□ -0.31
TSEN54-203ENST00000545228 GNG14A0A1W2PPG7 69 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 PYCARD-AS1I3L0S3 204 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 PIP5K1BO14986 540 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 HDAC3O15379 428 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 ITM2AO43736 263 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 SEC22BO75396 215 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 SKAP2O75563 359 aaPredicted RBP13.08□□□□□ -0.32
TSEN54-203ENST00000545228 LYPLA1O75608 230 aaPredicted RBP13.08□□□□□ -0.32
TSEN54-203ENST00000545228 HEXBP07686 556 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 FHP07954 510 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 ZGLP1P0C6A0 271 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 CPN2P22792 545 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 CERS1P27544 350 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 CCR10P46092 362 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 HTR6P50406 440 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 FOXA1P55317 472 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 AP2B1P63010 937 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 SSPNQ14714 243 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 HEPACAMQ14CZ8 416 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 TGIF1Q15583 401 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 NKG7Q16617 165 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 ADNP2Q6IQ32 1131 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 GALNT18Q6P9A2 607 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 MED25Q71SY5 747 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 PRICKLE2Q7Z3G6 844 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 COMMD6Q7Z4G1 85 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 EFCAB3Q8N7B9 438 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 AMER3Q8N944 861 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 STT3BQ8TCJ2 826 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 SORT1Q99523 831 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 CRB3Q9BUF7 120 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 MRPL1Q9BYD6 325 aaKnown RBP13.08□□□□□ -0.32
TSEN54-203ENST00000545228 LRTM1Q9HBL6 345 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 PRDM7Q9NQW5 492 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 FARSBQ9NSD9 589 aaKnown RBP13.08□□□□□ -0.32
TSEN54-203ENST00000545228 HCN3Q9P1Z3 774 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 PSME2Q9UL46 239 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 TCFL5Q9UL49 500 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 MRPS2Q9Y399 296 aaKnown RBP13.08□□□□□ -0.32
TSEN54-203ENST00000545228 PTRH2Q9Y3E5 179 aaKnown RBP13.08□□□□□ -0.32
TSEN54-203ENST00000545228 HEMK1Q9Y5R4 338 aaPredicted RBP13.08□□□□□ -0.32
TSEN54-203ENST00000545228 COL6A6A6NMZ7 2263 aa13.08□□□□□ -0.32
TSEN54-203ENST00000545228 SETXQ7Z333 2677 aaKnown RBP13.07□□□□□ -0.32
TSEN54-203ENST00000545228 CROCCQ5TZA2 2017 aa13.07□□□□□ -0.32
TSEN54-203ENST00000545228 LOC101059948A0A1B0GTJ6 334 aa13.07□□□□□ -0.32
TSEN54-203ENST00000545228 ZNF860A6NHJ4 632 aa13.07□□□□□ -0.32
TSEN54-203ENST00000545228 VSTM2BA6NLU5 285 aa13.07□□□□□ -0.32
TSEN54-203ENST00000545228 SAP18O00422 153 aaKnown RBP13.07□□□□□ -0.32
TSEN54-203ENST00000545228 PEX12O00623 359 aa13.07□□□□□ -0.32
TSEN54-203ENST00000545228 CHST10O43529 356 aa13.07□□□□□ -0.32
TSEN54-203ENST00000545228 PCDH7O60245 1069 aa13.07□□□□□ -0.32
TSEN54-203ENST00000545228 SH3BGRLO75368 114 aa13.07□□□□□ -0.32
TSEN54-203ENST00000545228 CREG1O75629 220 aa13.07□□□□□ -0.32
TSEN54-203ENST00000545228 WISP1O95388 367 aa13.07□□□□□ -0.32
TSEN54-203ENST00000545228 BMP10O95393 424 aa13.07□□□□□ -0.32
TSEN54-203ENST00000545228 TGDSO95455 350 aa13.07□□□□□ -0.32
TSEN54-203ENST00000545228 ITGB2P05107 769 aa13.07□□□□□ -0.32
TSEN54-203ENST00000545228 TROVE2P10155 538 aaKnown RBP eCLIP13.07□□□□□ -0.32
TSEN54-203ENST00000545228 LIFP15018 202 aa13.07□□□□□ -0.32
TSEN54-203ENST00000545228 SERPINB3P29508 390 aa13.07□□□□□ -0.32
TSEN54-203ENST00000545228 TIA1P31483 386 aaKnown RBP eCLIP13.07□□□□□ -0.32
TSEN54-203ENST00000545228 BSGP35613 385 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms