RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 HSD3B1P14060 373 aa17.98■□□□□ 0.47
DDX55-211ENST00000544429 HSD3B2P26439 372 aa17.98■□□□□ 0.47
DDX55-211ENST00000544429 SSR2P43308 183 aa17.98■□□□□ 0.47
DDX55-211ENST00000544429 HNRNPFP52597 415 aaKnown RBP17.98■□□□□ 0.47
DDX55-211ENST00000544429 FOXA1P55317 472 aa17.98■□□□□ 0.47
DDX55-211ENST00000544429 BTG2P78543 158 aa17.98■□□□□ 0.47
DDX55-211ENST00000544429 Q0VFX4 171 aa17.98■□□□□ 0.47
DDX55-211ENST00000544429 GALNT1Q10472 559 aaPredicted RBP17.98■□□□□ 0.47
DDX55-211ENST00000544429 TBL3Q12788 808 aaKnown RBP17.98■□□□□ 0.47
DDX55-211ENST00000544429 AIMP2Q13155 320 aaKnown RBP17.98■□□□□ 0.47
DDX55-211ENST00000544429 ABRAXAS2Q15018 415 aa17.98■□□□□ 0.47
DDX55-211ENST00000544429 TTC19Q6DKK2 380 aaPredicted RBP17.98■□□□□ 0.47
DDX55-211ENST00000544429 NDUFAF7Q7L592 441 aa17.98■□□□□ 0.47
DDX55-211ENST00000544429 ANKRD37Q7Z713 158 aa17.98■□□□□ 0.47
DDX55-211ENST00000544429 CLEC1AQ8NC01 280 aa17.98■□□□□ 0.47
DDX55-211ENST00000544429 METTL6Q8TCB7 284 aa17.98■□□□□ 0.47
DDX55-211ENST00000544429 SLC39A7Q92504 469 aa17.98■□□□□ 0.47
DDX55-211ENST00000544429 TSLPQ969D9 159 aa17.98■□□□□ 0.47
DDX55-211ENST00000544429 TLCD1Q96CP7 247 aa17.98■□□□□ 0.47
DDX55-211ENST00000544429 ABHD17AQ96GS6 310 aa17.98■□□□□ 0.47
DDX55-211ENST00000544429 CNDP1Q96KN2 507 aa17.98■□□□□ 0.47
DDX55-211ENST00000544429 IMMP1LQ96LU5 166 aa17.98■□□□□ 0.47
DDX55-211ENST00000544429 CSF3RQ99062 836 aa17.98■□□□□ 0.47
DDX55-211ENST00000544429 MAPKAP1Q9BPZ7 522 aa17.98■□□□□ 0.47
DDX55-211ENST00000544429 CENPKQ9BS16 269 aa17.98■□□□□ 0.47
DDX55-211ENST00000544429 MID1IP1Q9NPA3 183 aa17.98■□□□□ 0.47
DDX55-211ENST00000544429 MMACHCQ9Y4U1 282 aa17.98■□□□□ 0.47
DDX55-211ENST00000544429 TCRBV16S1A1N1A0A5B0 115 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 TM9SF1O15321 606 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 NPHS1O60500 1241 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 PRMT3O60678 531 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 B4GALT2O60909 372 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 EEDO75530 441 aaKnown RBP17.97■□□□□ 0.47
DDX55-211ENST00000544429 KRT6AP02538 564 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 KRT6BP04259 564 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 KRT6CP48668 564 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 HTR6P50406 440 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 RAP1GDS1P52306 607 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 HSD17B7P56937 341 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 ASPHQ12797 758 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 CSTF3Q12996 717 aaKnown RBP17.97■□□□□ 0.47
DDX55-211ENST00000544429 CFAP157Q5JU67 520 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 FAAH2Q6GMR7 532 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 TCTN3Q6NUS6 607 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 CPEB2Q7Z5Q1 589 aaKnown RBP17.97■□□□□ 0.47
DDX55-211ENST00000544429 ZNF595Q8IYB9 648 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 METTL4Q8N3J2 472 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 FDCSPQ8NFU4 85 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 SELENOMQ8WWX9 145 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 METTL21AQ8WXB1 218 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 ZBTB9Q96C00 473 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 C11orf24Q96F05 449 aaPredicted RBP17.97■□□□□ 0.47
DDX55-211ENST00000544429 KCNA7Q96RP8 456 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 CENPHQ9H3R5 247 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 ATP13A2Q9NQ11 1180 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 PRDM9Q9NQV7 894 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 ADAM29Q9UKF5 820 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 ASB4Q9Y574 426 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 TIMM22Q9Y584 194 aa17.97■□□□□ 0.47
DDX55-211ENST00000544429 CFAP46Q8IYW2 2715 aa17.96■□□□□ 0.47
DDX55-211ENST00000544429 MKRN2OSH3BPM6 223 aa17.96■□□□□ 0.47
DDX55-211ENST00000544429 TGFBR3LH3BV60 316 aa17.96■□□□□ 0.47
DDX55-211ENST00000544429 K7EM74 188 aa17.96■□□□□ 0.47
DDX55-211ENST00000544429 PSMD12O00232 456 aaPredicted RBP17.96■□□□□ 0.47
DDX55-211ENST00000544429 TMPRSS11DO60235 418 aa17.96■□□□□ 0.47
DDX55-211ENST00000544429 ULK1O75385 1050 aa17.96■□□□□ 0.47
DDX55-211ENST00000544429 MAOAP21397 527 aa17.96■□□□□ 0.47
DDX55-211ENST00000544429 ARRB2P32121 409 aa17.96■□□□□ 0.47
DDX55-211ENST00000544429 SERPINB4P48594 390 aa17.96■□□□□ 0.47
DDX55-211ENST00000544429 CCL11P51671 97 aa17.96■□□□□ 0.47
DDX55-211ENST00000544429 SLAMF1Q13291 335 aa17.96■□□□□ 0.47
DDX55-211ENST00000544429 NSDHLQ15738 373 aa17.96■□□□□ 0.47
DDX55-211ENST00000544429 SGO1Q5FBB7 561 aa17.96■□□□□ 0.47
DDX55-211ENST00000544429 ATG14Q6ZNE5 492 aa17.96■□□□□ 0.47
DDX55-211ENST00000544429 RNF165Q6ZSG1 346 aa17.96■□□□□ 0.47
DDX55-211ENST00000544429 GALNT16Q8N428 558 aa17.96■□□□□ 0.47
DDX55-211ENST00000544429 HBEGFQ99075 208 aa17.96■□□□□ 0.47
DDX55-211ENST00000544429 MRPL1Q9BYD6 325 aaKnown RBP17.96■□□□□ 0.47
DDX55-211ENST00000544429 ACPTQ9BZG2 426 aa17.96■□□□□ 0.47
DDX55-211ENST00000544429 STMN4Q9H169 189 aaPredicted RBP17.96■□□□□ 0.47
DDX55-211ENST00000544429 SLC25A18Q9H1K4 315 aa17.96■□□□□ 0.47
DDX55-211ENST00000544429 NECTIN3Q9NQS3 549 aa17.96■□□□□ 0.47
DDX55-211ENST00000544429 RIC8BQ9NVN3 520 aa17.96■□□□□ 0.47
DDX55-211ENST00000544429 C19orf25Q9UFG5 118 aaPredicted RBP17.96■□□□□ 0.47
DDX55-211ENST00000544429 SPTA1P02549 2419 aa17.96■□□□□ 0.46
DDX55-211ENST00000544429 CPAMD8Q8IZJ3 1885 aa17.95■□□□□ 0.46
DDX55-211ENST00000544429 NSG1A0A0A6YYJ2 146 aa17.95■□□□□ 0.46
DDX55-211ENST00000544429 C1QL1O75973 258 aa17.95■□□□□ 0.46
DDX55-211ENST00000544429 ZWINTO95229 277 aa17.95■□□□□ 0.46
DDX55-211ENST00000544429 PDGFAP04085 211 aa17.95■□□□□ 0.46
DDX55-211ENST00000544429 TPP2P29144 1249 aaPredicted RBP17.95■□□□□ 0.46
DDX55-211ENST00000544429 HMOX2P30519 316 aa17.95■□□□□ 0.46
DDX55-211ENST00000544429 SERPINB5P36952 375 aa17.95■□□□□ 0.46
DDX55-211ENST00000544429 SLC18A1P54219 525 aa17.95■□□□□ 0.46
DDX55-211ENST00000544429 HNRNPH2P55795 449 aaKnown RBP17.95■□□□□ 0.46
DDX55-211ENST00000544429 EEF1A2Q05639 463 aaKnown RBP17.95■□□□□ 0.46
DDX55-211ENST00000544429 RCN2Q14257 317 aa17.95■□□□□ 0.46
DDX55-211ENST00000544429 MYBPC3Q14896 1274 aa17.95■□□□□ 0.46
DDX55-211ENST00000544429 MFSD4BQ5TF39 518 aa17.95■□□□□ 0.46
DDX55-211ENST00000544429 CES4AQ5XG92 561 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms