RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 OR2Y1Q8NGV0 311 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 OR2T11Q8NH01 316 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 CHTF18Q8WVB6 975 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 CKAP2Q8WWK9 683 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 TBC1D20Q96BZ9 403 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 APIPQ96GX9 242 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 OR1F2PQ96R84 312 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 MAPKAP1Q9BPZ7 522 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 LYRM4Q9HD34 91 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 ADAM29Q9UKF5 820 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 FBXW2Q9UKT8 454 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 DAPP1Q9UN19 280 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 CCL27Q9Y4X3 112 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 SCN2AQ99250 2005 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 FAM227AF5H4B4 570 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 NKX2-8O15522 239 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 RGS14O43566 566 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 TMPRSS11DO60235 418 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 B4GALT2O60909 372 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 CDC123O75794 336 aaPredicted RBP12.85□□□□□ -0.35
SP140-213ENST00000543928 RSL1D1O76021 490 aaKnown RBP12.85□□□□□ -0.35
SP140-213ENST00000543928 UMODP07911 640 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 IL10P22301 178 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 TPP2P29144 1249 aaPredicted RBP12.85□□□□□ -0.35
SP140-213ENST00000543928 ACSM2AQ08AH3 577 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 IL10RAQ13651 578 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 NR6A1Q15406 480 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 PDCD2Q16342 344 aaPredicted RBP12.85□□□□□ -0.35
SP140-213ENST00000543928 MINDY4Q4G0A6 757 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 SPIN4Q56A73 249 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 CCNYL2Q5T2Q4 361 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 ACSM2BQ68CK6 577 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 Q6ZSR9 355 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 EFCAB3Q8N7B9 438 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 ADAMTS18Q8TE60 1221 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 MAGEB18Q96M61 343 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 CSF3RQ99062 836 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 CRB3Q9BUF7 120 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 LANCL2Q9NS86 450 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 LYARQ9NX58 379 aaKnown RBP12.85□□□□□ -0.35
SP140-213ENST00000543928 KCMF1Q9P0J7 381 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 C3orf18Q9UK00 162 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 MKL2Q9ULH7 1088 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 SPACA6W5XKT8 324 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 ZFHX4Q86UP3 3567 aa12.85□□□□□ -0.35
SP140-213ENST00000543928 ARHGAP10A1A4S6 786 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 OR2W5A6NFC9 320 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 SRRM3A6NNA2 597 aaPredicted RBP12.84□□□□□ -0.35
SP140-213ENST00000543928 ZNF891A8MT65 544 aaPredicted RBP12.84□□□□□ -0.35
SP140-213ENST00000543928 IDSB3KWA1 339 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 SEC22BO75396 215 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 JUNP05412 331 aaKnown RBP12.84□□□□□ -0.35
SP140-213ENST00000543928 HEXBP07686 556 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 FAM58BPP0C7Q3 252 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 KITP10721 976 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 CPN2P22792 545 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 JAK1P23458 1154 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 PRPH2P23942 346 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 OTX2P32243 289 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 EMP2P54851 167 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 UCNP55089 124 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 HNRNPH2P55795 449 aaKnown RBP12.84□□□□□ -0.35
SP140-213ENST00000543928 RAE1P78406 368 aaKnown RBP12.84□□□□□ -0.35
SP140-213ENST00000543928 MC1RQ01726 317 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 TUBB8Q3ZCM7 444 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 XKR7Q5GH72 579 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 MRM1Q6IN84 353 aaKnown RBP12.84□□□□□ -0.35
SP140-213ENST00000543928 GPR180Q86V85 440 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 CRLF3Q8IUI8 442 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 FAM47BQ8NA70 645 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 ZSCAN1Q8NBB4 408 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 FAM76AQ8TAV0 307 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 C19orf60Q96EN9 201 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 PPP1R36Q96LQ0 422 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 C3orf30Q96M34 536 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 CCT7Q99832 543 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 VN1R1Q9GZP7 353 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 LRTM1Q9HBL6 345 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 CPNE5Q9HCH3 593 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 SLCO1B3Q9NPD5 702 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 PFDN4Q9NQP4 134 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 C1orf109Q9NX04 203 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 MARCOQ9UEW3 520 aaPredicted RBP12.84□□□□□ -0.35
SP140-213ENST00000543928 PHF11Q9UIL8 331 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 MCM8Q9UJA3 840 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 ASB4Q9Y574 426 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 PTPRQQ9UMZ3 2332 aa12.84□□□□□ -0.35
SP140-213ENST00000543928 NUP210LQ5VU65 1888 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 ATP6AP2A0A1C7CYW4 349 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 GNG14A0A1W2PPG7 69 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 CDC14CA4D256 554 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 NPIPB8E9PQR5 432 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 CYR61O00622 381 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 LSM1O15116 133 aaKnown RBP12.83□□□□□ -0.36
SP140-213ENST00000543928 PCDH7O60245 1069 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 ATP6AP2O75787 350 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 RECKO95980 971 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 PRKAR1AP10644 381 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 TIA1P31483 386 aaKnown RBP eCLIP12.83□□□□□ -0.36
SP140-213ENST00000543928 HNRNPFP52597 415 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms