RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 CENPNQ96H22 339 aaPredicted RBP6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 CGREF1Q99674 301 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 ASPNQ9BXN1 380 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 SEC61A2Q9H9S3 476 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 GIN1Q9NXP7 522 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 NPIPA1Q9UND3 350 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 PSAT1Q9Y617 370 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 MYH3P11055 1940 aa6.64□□□□□ -1.35
SRGAP1-206ENST00000543397 A0A0U1RQK1 487 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 ZNF320A2RRD8 509 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 ZBTB42B2RXF5 422 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 TMEM233B4DJY2 109 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 SYNGR4O95473 234 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 ATF6P18850 670 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 EIF2DP41214 584 aaKnown RBP6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 SLC6A9P48067 706 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 SRP54P61011 504 aaKnown RBP6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 ITGADQ13349 1161 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 GANABQ14697 944 aaKnown RBP6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 TMEM44Q2T9K0 475 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 C1orf189Q5VU69 101 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 ZNF425Q6IV72 752 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 ZNF572Q7Z3I7 529 aaPredicted RBP6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 CAND1Q86VP6 1230 aaKnown RBP6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 OR52E4Q8NGH9 312 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 AGAP11Q8TF27 550 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 ISG20Q96AZ6 181 aaKnown RBP6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 TRIB3Q96RU7 358 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 MGME1Q9BQP7 344 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 TRIM2Q9C040 744 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 TPT1P8Q9HAU6 139 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 ZNF334Q9HCZ1 680 aaPredicted RBP6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 HMG20AQ9NP66 347 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 EPHA6Q9UF33 1036 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 SMAD6O43541 496 aaKnown RBP6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 CPNE3O75131 537 aaKnown RBP6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 OPN1SWP03999 348 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 P2RY2P41231 377 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 CD83Q01151 205 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 RPA4Q13156 261 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 DSC3Q14574 896 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 TANGO2Q6ICL3 276 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 FIGLAQ6QHK4 219 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 SLC7A5P1Q8MH63 180 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 SLC43A2Q8N370 569 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 SVOPLQ8N434 492 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 OR10H4Q8NGA5 316 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 GEMIN6Q8WXD5 167 aaKnown RBP6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 EBF4Q9BQW3 602 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 PAIP1Q9H074 479 aaKnown RBP6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 SMPD3Q9NY59 655 aaPredicted RBP6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 OARD1Q9Y530 152 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 CITO14578 2027 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 F5P12259 2224 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 M0QX08 132 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 SLC25A17O43808 307 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 HMGN1P05114 100 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 RAP2AP10114 183 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 G6PDP11413 515 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 ANXA8P13928 327 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 ACVR2AP27037 513 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 RPS9P46781 194 aaKnown RBP6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 CLDN2P57739 230 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 RPP30P78346 268 aaKnown RBP6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 POU6F2P78424 691 aaPredicted RBP6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 PLCXD2Q0VAA5 305 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 MLF2Q15773 248 aaPredicted RBP6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 GALNT12Q8IXK2 581 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 TMEFF1Q8IYR6 380 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 LNX2Q8N448 690 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 FAM156AQ8NDB6 213 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 ADAMTS18Q8TE60 1221 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 MOAP1Q96BY2 351 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 ZNF382Q96SR6 550 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 HHATLQ9HCP6 504 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 PREBQ9HCU5 417 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 SNTG1Q9NSN8 517 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 TVP23BQ9NYZ1 205 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 TRAV34A0A0B4J273 112 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 POM121BA6NF01 834 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 M0R3H8 397 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 ASNA1O43681 348 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 S1PR4O95977 384 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 ENDOUP21128 410 aaKnown RBP6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 MATN1P21941 496 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 SLC6A11P48066 632 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 EEFSECP57772 596 aaKnown RBP6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 SELENOVP59797 346 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 VLDLRP98155 873 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 EMX2Q04743 252 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 RIPK1Q13546 671 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 PUM1Q14671 1186 aaKnown RBP eCLIP6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 ZNF630Q2M218 657 aaPredicted RBP6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 SPANXN4Q5MJ08 99 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 LIN54Q6MZP7 749 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 SCML4Q8N228 414 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 ACVR1CQ8NER5 493 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 CCDC74BQ96LY2 380 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 CLEC4MQ9H2X3 399 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms