RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 NDUFAF4Q9P032 175 aa15.55■□□□□ 0.08
COL4A1-204ENST00000543140 SCHIP1Q9P0W5 487 aaPredicted RBP15.55■□□□□ 0.08
COL4A1-204ENST00000543140 KLHL20Q9Y2M5 609 aa15.55■□□□□ 0.08
COL4A1-204ENST00000543140 HTR1AP08908 422 aa15.55■□□□□ 0.08
COL4A1-204ENST00000543140 ITGAMP11215 1152 aa15.55■□□□□ 0.08
COL4A1-204ENST00000543140 TEAD1P28347 426 aa15.55■□□□□ 0.08
COL4A1-204ENST00000543140 CTHP32929 405 aa15.55■□□□□ 0.08
COL4A1-204ENST00000543140 SH3BGRP55822 239 aaPredicted RBP15.55■□□□□ 0.08
COL4A1-204ENST00000543140 FADDQ13158 208 aa15.55■□□□□ 0.08
COL4A1-204ENST00000543140 DYNC1I2Q13409 638 aaKnown RBP15.55■□□□□ 0.08
COL4A1-204ENST00000543140 RAB30Q15771 203 aa15.55■□□□□ 0.08
COL4A1-204ENST00000543140 TMEM31Q5JXX7 168 aa15.55■□□□□ 0.08
COL4A1-204ENST00000543140 TNFAIP8L2Q6P589 184 aaPredicted RBP15.55■□□□□ 0.08
COL4A1-204ENST00000543140 ERI1Q8IV48 349 aaKnown RBP15.55■□□□□ 0.08
COL4A1-204ENST00000543140 SLC44A2Q8IWA5 706 aaPredicted RBP15.55■□□□□ 0.08
COL4A1-204ENST00000543140 TTC29Q8NA56 475 aaPredicted RBP15.55■□□□□ 0.08
COL4A1-204ENST00000543140 RGMAQ96B86 450 aa15.55■□□□□ 0.08
COL4A1-204ENST00000543140 NLNQ9BYT8 704 aa15.55■□□□□ 0.08
COL4A1-204ENST00000543140 KLHL31Q9H511 634 aa15.55■□□□□ 0.08
COL4A1-204ENST00000543140 ICKQ9UPZ9 632 aa15.55■□□□□ 0.08
COL4A1-204ENST00000543140 KLHL33A6NCF5 533 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 PRAMEF25A6NGN4 478 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 H0Y8X5 98 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 CACNB4O00305 520 aaPredicted RBP15.54■□□□□ 0.08
COL4A1-204ENST00000543140 SLC1A7O00341 560 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 ABCB7O75027 752 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 KRT75O95678 551 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 C9P02748 559 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 FMO3P31513 532 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 EEF1A2Q05639 463 aaKnown RBP15.54■□□□□ 0.08
COL4A1-204ENST00000543140 CDK5R2Q13319 367 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 HEPACAMQ14CZ8 416 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 XAF1Q6GPH4 301 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 NUDT13Q86X67 352 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 TEFMQ96QE5 360 aaKnown RBP15.54■□□□□ 0.08
COL4A1-204ENST00000543140 GABRG3Q99928 467 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 CLDND1Q9NY35 253 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 RAB23Q9ULC3 237 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 PADI2Q9Y2J8 665 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 SH3GLB1Q9Y371 365 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 PDPK1O15530 556 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 UGT2B11O75310 529 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 UQCRC2P22695 453 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 PKLRP30613 574 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 SKIV2LQ15477 1246 aaKnown RBP15.54■□□□□ 0.08
COL4A1-204ENST00000543140 UAP1L1Q3KQV9 507 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 CEACAM20Q6UY09 585 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 SPARTQ8N0X7 666 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 C1QTNF7Q9BXJ2 289 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 AICDAQ9GZX7 198 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 TMEM38AQ9H6F2 299 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 PAK1IP1Q9NWT1 392 aaPredicted RBP15.54■□□□□ 0.08
COL4A1-204ENST00000543140 SPHK1Q9NYA1 384 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 GMPPBQ9Y5P6 360 aa15.54■□□□□ 0.08
COL4A1-204ENST00000543140 GLOD5A6NK44 160 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 SH3BP5O60239 455 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 PRKRAO75569 313 aaKnown RBP15.53■□□□□ 0.08
COL4A1-204ENST00000543140 GSSP48637 474 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 RBBP4Q09028 425 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 RPE65Q16518 533 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 IFI44LQ53G44 452 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 TMEM145Q8NBT3 493 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 UBE2FQ969M7 185 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 SIPA1Q96FS4 1042 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 RIPOR3Q96MK2 946 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 CCDC90BQ9GZT6 254 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 LHPPQ9H008 270 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 MRPS30Q9NP92 439 aaKnown RBP15.53■□□□□ 0.08
COL4A1-204ENST00000543140 PCDHGB3Q9Y5G1 929 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 PRUNE2Q8WUY3 3088 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 H3BMQ9 156 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 J3KTA2 159 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 JRKO75564 520 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 ATE1O95260 518 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 CPNE6O95741 557 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 EML2O95834 649 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 MATN1P21941 496 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 RYKP34925 604 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 PTGER1P34995 402 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 BCL6P41182 706 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 SSR2P43308 183 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 DSTNP60981 165 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 ZNF630Q2M218 657 aaPredicted RBP15.53■□□□□ 0.08
COL4A1-204ENST00000543140 SPDYE7PQ495Y7 208 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 RPS26P11Q5JNZ5 115 aaPredicted RBP15.53■□□□□ 0.08
COL4A1-204ENST00000543140 OR4C11Q6IEV9 310 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 FBXL6Q8N531 539 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 HORMAD2Q8N7B1 307 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 OR2L8Q8NGY9 312 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 CREB3L4Q8TEY5 395 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 LZICQ8WZA0 190 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 RAB8BQ92930 207 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 NRBF2Q96F24 287 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 PDXPQ96GD0 296 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 COG8Q96MW5 612 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 EPYCQ99645 322 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 SH3GL3Q99963 347 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 EPS8L2Q9H6S3 715 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 RMI1Q9H9A7 625 aa15.53■□□□□ 0.08
COL4A1-204ENST00000543140 SLC6A20Q9NP91 592 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms