RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 IDH2P48735 452 aaKnown RBP9.11□□□□□ -0.95
CNOT4-212ENST00000541284 CLK1P49759 484 aaKnown RBP9.11□□□□□ -0.95
CNOT4-212ENST00000541284 SEPHS1P49903 392 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 DEFB103AP81534 67 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 SEC23BQ15437 767 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 LRRC26Q2I0M4 334 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 BRAT1Q6PJG6 821 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.11□□□□□ -0.95
CNOT4-212ENST00000541284 DPPA4Q7L190 304 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 ZNF367Q7RTV3 350 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 COMTD1Q86VU5 262 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 ADGRF3Q8IZF5 1079 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 PAF1Q8N7H5 531 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 ZNF740Q8NDX6 193 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 IL17RDQ8NFM7 739 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 SORCS1Q8WY21 1168 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 GLYATL1Q969I3 302 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 TMEM169Q96HH4 297 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 RUBCNLQ9H714 662 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 WBP1LQ9NX94 342 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 SH3BP4Q9P0V3 963 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 PCYT1BQ9Y5K3 369 aaPredicted RBP9.11□□□□□ -0.95
CNOT4-212ENST00000541284 USP34Q70CQ2 3546 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 ABHD14A-ACY1A0A1B0GW23 586 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 PIPSLA2A3N6 862 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 SAGE2PA6NJ88 616 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 SAP18O00422 153 aaKnown RBP9.11□□□□□ -0.95
CNOT4-212ENST00000541284 TIMP1P01033 207 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 IGFBP1P08833 259 aaPredicted RBP9.11□□□□□ -0.95
CNOT4-212ENST00000541284 ENDOUP21128 410 aaKnown RBP9.11□□□□□ -0.95
CNOT4-212ENST00000541284 PTX3P26022 381 aaPredicted RBP9.11□□□□□ -0.95
CNOT4-212ENST00000541284 CASP3P42574 277 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 METAP1P53582 386 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 CDK6Q00534 326 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 ZNF45Q02386 682 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 FLYWCH1Q4VC44 716 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 MED27Q6P2C8 311 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 TMPRSS11BQ86T26 416 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 OR4D11Q8NGI4 311 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 ATL1Q8WXF7 558 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 ZNF558Q96NG5 402 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 C6orf62Q9GZU0 229 aaPredicted RBP9.11□□□□□ -0.95
CNOT4-212ENST00000541284 OR51B5Q9H339 312 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 CXorf36Q9H7Y0 433 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 SIAEQ9HAT2 523 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 CNOT2Q9NZN8 540 aaKnown RBP9.11□□□□□ -0.95
CNOT4-212ENST00000541284 ENPP4Q9Y6X5 453 aa9.11□□□□□ -0.95
CNOT4-212ENST00000541284 KIAA0513O60268 411 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 KDM1AO60341 852 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 PQBP1O60828 265 aaKnown RBP9.1□□□□□ -0.95
CNOT4-212ENST00000541284 SNX4O95219 450 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 URODP06132 367 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 POU2F1P14859 743 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 RCVRNP35243 200 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 TMED10P49755 219 aaKnown RBP9.1□□□□□ -0.95
CNOT4-212ENST00000541284 LRRC74AQ0VAA2 488 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 TP53BP2Q13625 1128 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 SLBPQ14493 270 aaKnown RBP eCLIP9.1□□□□□ -0.95
CNOT4-212ENST00000541284 SPATC1Q76KD6 591 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 CELF2-AS1Q8N7Q2 184 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 MRPS31Q92665 395 aaKnown RBP9.1□□□□□ -0.95
CNOT4-212ENST00000541284 EFHD2Q96C19 240 aaPredicted RBP9.1□□□□□ -0.95
CNOT4-212ENST00000541284 NRTNQ99748 197 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 CHCHD6Q9BRQ6 235 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 ZSCAN5AQ9BUG6 496 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 SORBS1Q9BX66 1292 aaKnown RBP9.1□□□□□ -0.95
CNOT4-212ENST00000541284 NMNAT1Q9HAN9 279 aaPredicted RBP9.1□□□□□ -0.95
CNOT4-212ENST00000541284 HCFC1R1Q9NWW0 138 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 PCDH10Q9P2E7 1040 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 ITM2BQ9Y287 266 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 PCDHGB6Q9Y5F9 930 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 TRAV19A0A0A6YYK7 116 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 TRBV4-1A0A0J9YWV2 114 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 MGAT4DA6NG13 374 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 ZW10O43264 779 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 OXSR1O95747 527 aaPredicted RBP9.1□□□□□ -0.95
CNOT4-212ENST00000541284 PIPP12273 146 aaPredicted RBP9.1□□□□□ -0.95
CNOT4-212ENST00000541284 CNR2P34972 360 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 MEF2AQ02078 507 aaPredicted RBP9.1□□□□□ -0.95
CNOT4-212ENST00000541284 TMEM115Q12893 351 aaPredicted RBP9.1□□□□□ -0.95
CNOT4-212ENST00000541284 CAMK1Q14012 370 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 CARTPTQ16568 116 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 LEXMQ3ZCV2 418 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 ARSIQ5FYB1 569 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 TMEM201Q5SNT2 666 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 FRMPD2BQ6IN97 320 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 LIPIQ6XZB0 460 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 ZNF547Q8IVP9 402 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 SCAIQ8N9R8 606 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 GEMIN6Q8WXD5 167 aaKnown RBP9.1□□□□□ -0.95
CNOT4-212ENST00000541284 GTPBP3Q969Y2 492 aaKnown RBP9.1□□□□□ -0.95
CNOT4-212ENST00000541284 TCEAL4Q96EI5 215 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 CRELD1Q96HD1 420 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 EMILIN2Q9BXX0 1053 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 KLHL25Q9H0H3 589 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 RHCGQ9UBD6 479 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 SLC25A13Q9UJS0 675 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 MAPRE3Q9UPY8 281 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 ICKQ9UPZ9 632 aa9.1□□□□□ -0.95
CNOT4-212ENST00000541284 HCN4Q9Y3Q4 1203 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms