RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 REEP4Q9H6H4 257 aa13.49□□□□□ -0.25
INO80E-203ENST00000540562 CXorf36Q9H7Y0 433 aa13.49□□□□□ -0.25
INO80E-203ENST00000540562 SLAMF7Q9NQ25 335 aa13.49□□□□□ -0.25
INO80E-203ENST00000540562 NECTIN3Q9NQS3 549 aa13.49□□□□□ -0.25
INO80E-203ENST00000540562 CLCA1A8K7I4 914 aa13.49□□□□□ -0.25
INO80E-203ENST00000540562 M0R3H8 397 aa13.49□□□□□ -0.25
INO80E-203ENST00000540562 CNOT3O75175 753 aaKnown RBP13.49□□□□□ -0.25
INO80E-203ENST00000540562 OLFM2O95897 454 aa13.49□□□□□ -0.25
INO80E-203ENST00000540562 FHP07954 510 aa13.49□□□□□ -0.25
INO80E-203ENST00000540562 GGT2P36268 569 aa13.49□□□□□ -0.25
INO80E-203ENST00000540562 HOXC5Q00444 222 aa13.49□□□□□ -0.25
INO80E-203ENST00000540562 CSTF3Q12996 717 aaKnown RBP13.49□□□□□ -0.25
INO80E-203ENST00000540562 IL18R1Q13478 541 aa13.49□□□□□ -0.25
INO80E-203ENST00000540562 HENMT1Q5T8I9 393 aaKnown RBP13.49□□□□□ -0.25
INO80E-203ENST00000540562 PARP16Q8N5Y8 322 aa13.49□□□□□ -0.25
INO80E-203ENST00000540562 DTX3Q8N9I9 347 aa13.49□□□□□ -0.25
INO80E-203ENST00000540562 NXPE3Q969Y0 559 aa13.49□□□□□ -0.25
INO80E-203ENST00000540562 NUAK2Q9H093 628 aa13.49□□□□□ -0.25
INO80E-203ENST00000540562 NMNAT1Q9HAN9 279 aaPredicted RBP13.49□□□□□ -0.25
INO80E-203ENST00000540562 EQTNQ9NQ60 294 aa13.49□□□□□ -0.25
INO80E-203ENST00000540562 SPHK2Q9NRA0 654 aa13.49□□□□□ -0.25
INO80E-203ENST00000540562 TMEM45AQ9NWC5 275 aa13.49□□□□□ -0.25
INO80E-203ENST00000540562 TOR4AQ9NXH8 423 aa13.49□□□□□ -0.25
INO80E-203ENST00000540562 PSORS1C1Q9UIG5 152 aa13.49□□□□□ -0.25
INO80E-203ENST00000540562 CARD8Q9Y2G2 431 aa13.49□□□□□ -0.25
INO80E-203ENST00000540562 SNPHO15079 494 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 ZW10O43264 779 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 ENTPD6O75354 484 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 POP7O75817 140 aaKnown RBP13.48□□□□□ -0.25
INO80E-203ENST00000540562 SLCO2B1O94956 709 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 C1orf105O95561 183 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 MANFP55145 182 aaKnown RBP13.48□□□□□ -0.25
INO80E-203ENST00000540562 LIM2P55344 173 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 MLLT1Q03111 559 aaPredicted RBP13.48□□□□□ -0.25
INO80E-203ENST00000540562 ZC3H12BQ5HYM0 836 aaKnown RBP13.48□□□□□ -0.25
INO80E-203ENST00000540562 C10orf62Q5T681 223 aaPredicted RBP13.48□□□□□ -0.25
INO80E-203ENST00000540562 LYSMD2Q8IV50 215 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 MALT1Q9UDY8 824 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 IL36AQ9UHA7 158 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 GPR52Q9Y2T5 361 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 A0A1W2PS29 197 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 SLC35F4A4IF30 521 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 ERAL1O75616 437 aaKnown RBP13.48□□□□□ -0.25
INO80E-203ENST00000540562 KCNK2O95069 426 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 GSTT2P0CG29 244 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 GSTT2BP0CG30 244 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 CYP2A6P11509 494 aaPredicted RBP13.48□□□□□ -0.25
INO80E-203ENST00000540562 DEFB115Q30KQ5 88 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 TMIGD1Q6UXZ0 262 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 LACC1Q8IV20 430 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 MMAAQ8IVH4 418 aaKnown RBP13.48□□□□□ -0.25
INO80E-203ENST00000540562 HORMAD2Q8N7B1 307 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 PLA2G15Q8NCC3 412 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 RHOXF1Q8NHV9 184 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 CHTF18Q8WVB6 975 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 LRRC3BQ96PB8 259 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 CDADC1Q9BWV3 514 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 YARS2Q9Y2Z4 477 aaKnown RBP13.48□□□□□ -0.25
INO80E-203ENST00000540562 IFT52Q9Y366 437 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 CNTRLQ7Z7A1 2325 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 NPC1O15118 1278 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 ADAMDEC1O15204 470 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 PSIP1O75475 530 aaKnown RBP13.48□□□□□ -0.25
INO80E-203ENST00000540562 HOXB3P14651 431 aaPredicted RBP13.48□□□□□ -0.25
INO80E-203ENST00000540562 CHMP24386 653 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 GRK3P35626 688 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 EIF2DP41214 584 aaKnown RBP13.48□□□□□ -0.25
INO80E-203ENST00000540562 SLC6A11P48066 632 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 RGS6P49758 472 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 CAV3P56539 151 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 TAP2Q03519 686 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 SEC23BQ15437 767 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 KCNJ8Q15842 424 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 FAM214AQ32MH5 1076 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 DGLUCYQ7Z3D6 616 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 FAM9CQ8IZT9 166 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 TCEANCQ8N8B7 351 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 S100ZQ8WXG8 99 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 VWCEQ96DN2 955 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 COL21A1Q96P44 957 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 MGLLQ99685 303 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 RSPO3Q9BXY4 272 aaPredicted RBP13.48□□□□□ -0.25
INO80E-203ENST00000540562 TIGARQ9NQ88 270 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 TVP23BQ9NYZ1 205 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 BOLA1Q9Y3E2 137 aa13.48□□□□□ -0.25
INO80E-203ENST00000540562 CH25HO95992 272 aa13.47□□□□□ -0.25
INO80E-203ENST00000540562 SEMG1P04279 462 aa13.47□□□□□ -0.25
INO80E-203ENST00000540562 CDK1P06493 297 aa13.47□□□□□ -0.25
INO80E-203ENST00000540562 RHOP08100 348 aa13.47□□□□□ -0.25
INO80E-203ENST00000540562 MPC1LP0DKB6 136 aa13.47□□□□□ -0.25
INO80E-203ENST00000540562 SF3B4Q15427 424 aaKnown RBP eCLIP13.47□□□□□ -0.252e-10■■■■□ 20.9
INO80E-203ENST00000540562 MICAQ29983 383 aa13.47□□□□□ -0.25
INO80E-203ENST00000540562 CLEC12AQ5QGZ9 265 aa13.47□□□□□ -0.25
INO80E-203ENST00000540562 ZNF566Q969W8 418 aa13.47□□□□□ -0.25
INO80E-203ENST00000540562 TRMT61BQ9BVS5 477 aaKnown RBP13.47□□□□□ -0.25
INO80E-203ENST00000540562 DMRT3Q9NQL9 472 aa13.47□□□□□ -0.25
INO80E-203ENST00000540562 ACER3Q9NUN7 267 aa13.47□□□□□ -0.25
INO80E-203ENST00000540562 ZNF282Q9UDV7 671 aaPredicted RBP13.47□□□□□ -0.25
INO80E-203ENST00000540562 PCDHGA2Q9Y5H1 932 aa13.47□□□□□ -0.25
INO80E-203ENST00000540562 PLXNB3Q9ULL4 1909 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms