RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 SERPINB5P36952 375 aa20.77■□□□□ 0.92
TRIM65-202ENST00000540128 TCHHL1Q5QJ38 904 aaPredicted RBP20.77■□□□□ 0.92
TRIM65-202ENST00000540128 AGBL2Q5U5Z8 902 aa20.77■□□□□ 0.92
TRIM65-202ENST00000540128 MRM1Q6IN84 353 aaKnown RBP20.77■□□□□ 0.92
TRIM65-202ENST00000540128 NDUFAF7Q7L592 441 aa20.77■□□□□ 0.92
TRIM65-202ENST00000540128 HOMEZQ8IX15 550 aa20.77■□□□□ 0.92
TRIM65-202ENST00000540128 METTL4Q8N3J2 472 aa20.77■□□□□ 0.92
TRIM65-202ENST00000540128 GBP7Q8N8V2 638 aaPredicted RBP20.77■□□□□ 0.92
TRIM65-202ENST00000540128 SREK1Q8WXA9 508 aaKnown RBP20.77■□□□□ 0.92
TRIM65-202ENST00000540128 C8orf44Q96CB5 159 aa20.77■□□□□ 0.92
TRIM65-202ENST00000540128 SORBS1Q9BX66 1292 aaKnown RBP20.77■□□□□ 0.92
TRIM65-202ENST00000540128 RBCK1Q9BYM8 510 aa20.77■□□□□ 0.92
TRIM65-202ENST00000540128 ZNF700Q9H0M5 742 aa20.77■□□□□ 0.92
TRIM65-202ENST00000540128 TNFRSF12AQ9NP84 129 aa20.77■□□□□ 0.92
TRIM65-202ENST00000540128 KCNK9Q9NPC2 374 aa20.77■□□□□ 0.92
TRIM65-202ENST00000540128 ATP13A2Q9NQ11 1180 aa20.77■□□□□ 0.92
TRIM65-202ENST00000540128 PRDM9Q9NQV7 894 aa20.77■□□□□ 0.92
TRIM65-202ENST00000540128 NMRK1Q9NWW6 199 aa20.77■□□□□ 0.92
TRIM65-202ENST00000540128 TIMM22Q9Y584 194 aa20.77■□□□□ 0.92
TRIM65-202ENST00000540128 IGKV3D-11A0A0A0MRZ8 115 aa20.76■□□□□ 0.91
TRIM65-202ENST00000540128 IGHV1-45A0A0A0MS14 117 aa20.76■□□□□ 0.91
TRIM65-202ENST00000540128 PRMT3O60678 531 aa20.76■□□□□ 0.91
TRIM65-202ENST00000540128 EEDO75530 441 aaKnown RBP20.76■□□□□ 0.91
TRIM65-202ENST00000540128 CDC123O75794 336 aaPredicted RBP20.76■□□□□ 0.91
TRIM65-202ENST00000540128 FGF4P08620 206 aa20.76■□□□□ 0.91
TRIM65-202ENST00000540128 FAM87AP0C7U9 286 aa20.76■□□□□ 0.91
TRIM65-202ENST00000540128 COX6A1P12074 109 aa20.76■□□□□ 0.91
TRIM65-202ENST00000540128 FOXA1P55317 472 aa20.76■□□□□ 0.91
TRIM65-202ENST00000540128 HSD17B7P56937 341 aa20.76■□□□□ 0.91
TRIM65-202ENST00000540128 MAGOHP61326 146 aaKnown RBP20.76■□□□□ 0.91
TRIM65-202ENST00000540128 CSTF3Q12996 717 aaKnown RBP20.76■□□□□ 0.91
TRIM65-202ENST00000540128 SLAMF1Q13291 335 aa20.76■□□□□ 0.91
TRIM65-202ENST00000540128 NSDHLQ15738 373 aa20.76■□□□□ 0.91
TRIM65-202ENST00000540128 MFSD4BQ5TF39 518 aa20.76■□□□□ 0.91
TRIM65-202ENST00000540128 FAM219BQ5XKK7 198 aa20.76■□□□□ 0.91
TRIM65-202ENST00000540128 NUDCD3Q8IVD9 361 aa20.76■□□□□ 0.91
TRIM65-202ENST00000540128 SCUBE1Q8IWY4 988 aa20.76■□□□□ 0.91
TRIM65-202ENST00000540128 ZNF595Q8IYB9 648 aa20.76■□□□□ 0.91
TRIM65-202ENST00000540128 KCNA7Q96RP8 456 aa20.76■□□□□ 0.91
TRIM65-202ENST00000540128 MAPKAP1Q9BPZ7 522 aa20.76■□□□□ 0.91
TRIM65-202ENST00000540128 MLXIPLQ9NP71 852 aa20.76■□□□□ 0.91
TRIM65-202ENST00000540128 MS4A12Q9NXJ0 267 aa20.76■□□□□ 0.91
TRIM65-202ENST00000540128 C19orf25Q9UFG5 118 aaPredicted RBP20.76■□□□□ 0.91
TRIM65-202ENST00000540128 NBEAQ8NFP9 2946 aa20.76■□□□□ 0.91
TRIM65-202ENST00000540128 TLN1Q9Y490 2541 aaKnown RBP20.75■□□□□ 0.91
TRIM65-202ENST00000540128 BLACEA4D250 179 aa20.75■□□□□ 0.91
TRIM65-202ENST00000540128 CLDN4O14493 209 aa20.75■□□□□ 0.91
TRIM65-202ENST00000540128 DNAJB5O75953 348 aa20.75■□□□□ 0.91
TRIM65-202ENST00000540128 HTR6P50406 440 aa20.75■□□□□ 0.91
TRIM65-202ENST00000540128 CCL11P51671 97 aa20.75■□□□□ 0.91
TRIM65-202ENST00000540128 BTG2P78543 158 aa20.75■□□□□ 0.91
TRIM65-202ENST00000540128 TBL3Q12788 808 aaKnown RBP20.75■□□□□ 0.91
TRIM65-202ENST00000540128 CHAF1BQ13112 559 aa20.75■□□□□ 0.91
TRIM65-202ENST00000540128 AIMP2Q13155 320 aaKnown RBP20.75■□□□□ 0.91
TRIM65-202ENST00000540128 KCNAB2Q13303 367 aa20.75■□□□□ 0.91
TRIM65-202ENST00000540128 ABRAXAS2Q15018 415 aa20.75■□□□□ 0.91
TRIM65-202ENST00000540128 PCOLCEQ15113 449 aa20.75■□□□□ 0.91
TRIM65-202ENST00000540128 ARL13AQ5H913 290 aaPredicted RBP20.75■□□□□ 0.91
TRIM65-202ENST00000540128 FAAH2Q6GMR7 532 aa20.75■□□□□ 0.91
TRIM65-202ENST00000540128 TRIM46Q7Z4K8 759 aa20.75■□□□□ 0.91
TRIM65-202ENST00000540128 CPEB2Q7Z5Q1 589 aaKnown RBP20.75■□□□□ 0.91
TRIM65-202ENST00000540128 ANKRD37Q7Z713 158 aa20.75■□□□□ 0.91
TRIM65-202ENST00000540128 CUZD1Q86UP6 607 aa20.75■□□□□ 0.91
TRIM65-202ENST00000540128 NUDT13Q86X67 352 aa20.75■□□□□ 0.91
TRIM65-202ENST00000540128 CLEC1AQ8NC01 280 aa20.75■□□□□ 0.91
TRIM65-202ENST00000540128 IMMP1LQ96LU5 166 aa20.75■□□□□ 0.91
TRIM65-202ENST00000540128 PTCHD1Q96NR3 888 aa20.75■□□□□ 0.91
TRIM65-202ENST00000540128 BBC3Q96PG8 261 aaPredicted RBP20.75■□□□□ 0.91
TRIM65-202ENST00000540128 VPS29Q9UBQ0 182 aa20.75■□□□□ 0.91
TRIM65-202ENST00000540128 SLC12A4Q9UP95 1085 aa20.75■□□□□ 0.91
TRIM65-202ENST00000540128 MRPS33Q9Y291 106 aaKnown RBP20.75■□□□□ 0.91
TRIM65-202ENST00000540128 ASB4Q9Y574 426 aa20.75■□□□□ 0.91
TRIM65-202ENST00000540128 PCDHGA9Q9Y5G4 932 aaKnown RBP20.75■□□□□ 0.91
TRIM65-202ENST00000540128 CLDN16Q9Y5I7 305 aa20.75■□□□□ 0.91
TRIM65-202ENST00000540128 SCN2AQ99250 2005 aa20.75■□□□□ 0.91
TRIM65-202ENST00000540128 SPTA1P02549 2419 aa20.74■□□□□ 0.91
TRIM65-202ENST00000540128 TMPRSS11DO60235 418 aa20.74■□□□□ 0.91
TRIM65-202ENST00000540128 CTNSO60931 367 aa20.74■□□□□ 0.91
TRIM65-202ENST00000540128 UROSP10746 265 aa20.74■□□□□ 0.91
TRIM65-202ENST00000540128 HNRNPFP52597 415 aaKnown RBP20.74■□□□□ 0.91
TRIM65-202ENST00000540128 SOWAHCQ53LP3 525 aaPredicted RBP20.74■□□□□ 0.91
TRIM65-202ENST00000540128 NUP210LQ5VU65 1888 aa20.74■□□□□ 0.91
TRIM65-202ENST00000540128 RNF165Q6ZSG1 346 aa20.74■□□□□ 0.91
TRIM65-202ENST00000540128 LANCL3Q6ZV70 420 aa20.74■□□□□ 0.91
TRIM65-202ENST00000540128 GPR180Q86V85 440 aa20.74■□□□□ 0.91
TRIM65-202ENST00000540128 TMEM52Q8NDY8 209 aa20.74■□□□□ 0.91
TRIM65-202ENST00000540128 CHTF18Q8WVB6 975 aa20.74■□□□□ 0.91
TRIM65-202ENST00000540128 TSLPQ969D9 159 aa20.74■□□□□ 0.91
TRIM65-202ENST00000540128 ARL8AQ96BM9 186 aa20.74■□□□□ 0.91
TRIM65-202ENST00000540128 CSF3RQ99062 836 aa20.74■□□□□ 0.91
TRIM65-202ENST00000540128 SH3GL2Q99962 352 aa20.74■□□□□ 0.91
TRIM65-202ENST00000540128 WDR77Q9BQA1 342 aaPredicted RBP20.74■□□□□ 0.91
TRIM65-202ENST00000540128 MRPL1Q9BYD6 325 aaKnown RBP20.74■□□□□ 0.91
TRIM65-202ENST00000540128 ACPTQ9BZG2 426 aa20.74■□□□□ 0.91
TRIM65-202ENST00000540128 EML4Q9HC35 981 aaKnown RBP20.74■□□□□ 0.91
TRIM65-202ENST00000540128 PRTFDC1Q9NRG1 225 aa20.74■□□□□ 0.91
TRIM65-202ENST00000540128 LYARQ9NX58 379 aaKnown RBP20.74■□□□□ 0.91
TRIM65-202ENST00000540128 PHF11Q9UIL8 331 aa20.74■□□□□ 0.91
TRIM65-202ENST00000540128 SPACA6W5XKT8 324 aa20.74■□□□□ 0.91
TRIM65-202ENST00000540128 NSG1A0A0A6YYJ2 146 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms