RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 LIM2P55344 173 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 WDR4P57081 412 aaKnown RBP6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 RAB38P57729 211 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 ZNF33BQ06732 778 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 ATP1A4Q13733 1029 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 RUNX2Q13950 521 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 SSPNQ14714 243 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 ABRAXAS2Q15018 415 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 CHI3L2Q15782 390 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 SGO1Q5FBB7 561 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 ARL13AQ5H913 290 aaPredicted RBP6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 KANK2Q63ZY3 851 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 CLEC6AQ6EIG7 209 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 OR4C11Q6IEV9 310 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 MED25Q71SY5 747 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 GPR155Q7Z3F1 870 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 PPP1R32Q7Z5V6 425 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 CUZD1Q86UP6 607 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 NUDT13Q86X67 352 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 RAB43Q86YS6 212 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 NUDCD3Q8IVD9 361 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 PRSS58Q8IYP2 241 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 ZCCHC7Q8N3Z6 543 aaKnown RBP6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 ANKRD42Q8N9B4 389 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 ZNF454Q8N9F8 522 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 ACOT4Q8N9L9 421 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 METTL6Q8TCB7 284 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 ADAMTS18Q8TE60 1221 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 SELENOMQ8WWX9 145 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 RGMAQ96B86 450 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 NACC2Q96BF6 587 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 MTFMTQ96DP5 389 aaKnown RBP6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 PEX11GQ96HA9 241 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 SERPINI1Q99574 410 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 KRTAP4-12Q9BQ66 201 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 MESP1Q9BRJ9 268 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 CENPKQ9BS16 269 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 CRB3Q9BUF7 120 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 YIPF2Q9BWQ6 316 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 MRPL1Q9BYD6 325 aaKnown RBP6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 ACPTQ9BZG2 426 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 SHCBP1LQ9BZQ2 653 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 ROGDIQ9GZN7 287 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 VN1R1Q9GZP7 353 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 MLXIPLQ9NP71 852 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 SEMA3GQ9NS98 782 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 C3orf18Q9UK00 162 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 DAPP1Q9UN19 280 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 POLHQ9Y253 713 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 TIMM22Q9Y584 194 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 HS3ST3B1Q9Y662 390 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 CACNA1BQ00975 2339 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 TNRC6AQ8NDV7 1962 aaKnown RBP6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 DOCK10Q96BY6 2186 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 A0A1W2PQ72 361 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 WDR91A4D1P6 747 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 TMEM114B3SHH9 223 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 TMEM233B4DJY2 109 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 CYR61O00622 381 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 PCDH17O14917 1159 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 AZIN1O14977 448 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 ULK1O75385 1050 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 EEDO75530 441 aaKnown RBP6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 CRCPO75575 148 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 LYPLA1O75608 230 aaPredicted RBP6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 CDC123O75794 336 aaPredicted RBP6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 IGHEP01854 428 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 ITGB2P05107 769 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 HEXBP07686 556 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 CHN1P15882 459 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 BGNP21810 368 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 JAK1P23458 1154 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 GRK2P25098 689 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 TPP2P29144 1249 aaPredicted RBP6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 SERPINB3P29508 390 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 HNRNPFP52597 415 aaKnown RBP6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 HNRNPH2P55795 449 aaKnown RBP6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 RHAGQ02094 409 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 TBL3Q12788 808 aaKnown RBP6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 AP5B1Q2VPB7 878 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 UGT3A2Q3SY77 523 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 TUBB8Q3ZCM7 444 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 MINDY4Q4G0A6 757 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 SH2D4BQ5SQS7 431 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 HHATQ5VTY9 493 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 CPZQ66K79 652 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 MRM1Q6IN84 353 aaKnown RBP6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 TMEM205Q6UW68 189 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 QSOX2Q6ZRP7 698 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 RNF165Q6ZSG1 346 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 COMMD6Q7Z4G1 85 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 METTL4Q8N3J2 472 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 GOLGA6L1Q8N7Z2 621 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 GBP7Q8N8V2 638 aaPredicted RBP6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 FAM47BQ8NA70 645 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 TMEM52Q8NDY8 209 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 MGARPQ8TDB4 240 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 THAP4Q8WY91 577 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 TBC1D20Q96BZ9 403 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 CATSPER2Q96P56 530 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms