RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 SNX8Q9Y5X2 465 aa21.32■■□□□ 1
HOMER3-204ENST00000539827 C2orf74A8MZ97 194 aa21.32■■□□□ 1
HOMER3-204ENST00000539827 TLR4O00206 839 aa21.32■■□□□ 1
HOMER3-204ENST00000539827 ACOX3O15254 700 aa21.32■■□□□ 1
HOMER3-204ENST00000539827 BCKDHBP21953 392 aa21.32■■□□□ 1
HOMER3-204ENST00000539827 KDELR2P33947 212 aa21.32■■□□□ 1
HOMER3-204ENST00000539827 HSPA13P48723 471 aa21.32■■□□□ 1
HOMER3-204ENST00000539827 STXBP1P61764 594 aaKnown RBP21.32■■□□□ 1
HOMER3-204ENST00000539827 HHEXQ03014 270 aa21.32■■□□□ 1
HOMER3-204ENST00000539827 INTS11Q5TA45 600 aaKnown RBP21.32■■□□□ 1
HOMER3-204ENST00000539827 NDUFAF5Q5TEU4 345 aa21.32■■□□□ 1
HOMER3-204ENST00000539827 SPESP1Q6UW49 350 aa21.32■■□□□ 1
HOMER3-204ENST00000539827 TMEM26Q6ZUK4 368 aa21.32■■□□□ 1
HOMER3-204ENST00000539827 SPRED1Q7Z699 444 aa21.32■■□□□ 1
HOMER3-204ENST00000539827 OR52N2Q8NGI0 321 aa21.32■■□□□ 1
HOMER3-204ENST00000539827 LMX1AQ8TE12 382 aa21.32■■□□□ 1
HOMER3-204ENST00000539827 OR5P2Q8WZ92 322 aa21.32■■□□□ 1
HOMER3-204ENST00000539827 GATA6Q92908 595 aa21.32■■□□□ 1
HOMER3-204ENST00000539827 PYURFQ96I23 114 aa21.32■■□□□ 1
HOMER3-204ENST00000539827 CXorf56Q9H5V9 222 aa21.32■■□□□ 1
HOMER3-204ENST00000539827 TM9SF3Q9HD45 589 aa21.32■■□□□ 1
HOMER3-204ENST00000539827 FAF1Q9UNN5 650 aaPredicted RBP21.32■■□□□ 1
HOMER3-204ENST00000539827 ASB4Q9Y574 426 aa21.32■■□□□ 1
HOMER3-204ENST00000539827 COL6A3P12111 3177 aa21.32■■□□□ 1
HOMER3-204ENST00000539827 GLOD5A6NK44 160 aa21.31■■□□□ 1
HOMER3-204ENST00000539827 H0YJX3 145 aa21.31■■□□□ 1
HOMER3-204ENST00000539827 DENRO43583 198 aaKnown RBP21.31■■□□□ 1
HOMER3-204ENST00000539827 CSF2P04141 144 aa21.31■■□□□ 1
HOMER3-204ENST00000539827 MAZP56270 477 aaKnown RBP21.31■■□□□ 1
HOMER3-204ENST00000539827 RACK1P63244 317 aaKnown RBP21.31■■□□□ 1
HOMER3-204ENST00000539827 PDK3Q15120 406 aa21.31■■□□□ 1
HOMER3-204ENST00000539827 RNF130Q86XS8 419 aa21.31■■□□□ 1
HOMER3-204ENST00000539827 CAMKK1Q8N5S9 505 aa21.31■■□□□ 1
HOMER3-204ENST00000539827 BDH2Q9BUT1 245 aa21.31■■□□□ 1
HOMER3-204ENST00000539827 SPATA9Q9BWV2 254 aa21.31■■□□□ 1
HOMER3-204ENST00000539827 Q9H521 79 aa21.31■■□□□ 1
HOMER3-204ENST00000539827 NTN4Q9HB63 628 aa21.31■■□□□ 1
HOMER3-204ENST00000539827 TRIOO75962 3097 aa21.31■■□□□ 1
HOMER3-204ENST00000539827 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 RNF103-CHMP3A0A140T963 221 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 TYRP1P17643 537 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 UQCRC2P22695 453 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 PCBP4P57723 403 aaKnown RBP21.3■■□□□ 1
HOMER3-204ENST00000539827 PPP1CAP62136 330 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 SNRPNP63162 240 aaKnown RBP21.3■■□□□ 1
HOMER3-204ENST00000539827 BTN3A2P78410 334 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 RGS1Q08116 209 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 BLMHQ13867 455 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 COL9A2Q14055 689 aaPredicted RBP21.3■■□□□ 1
HOMER3-204ENST00000539827 SLC5A12Q1EHB4 618 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 TMTC4Q5T4D3 741 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 MRM1Q6IN84 353 aaKnown RBP21.3■■□□□ 1
HOMER3-204ENST00000539827 TMEFF1Q8IYR6 380 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 SRFBP1Q8NEF9 429 aaKnown RBP21.3■■□□□ 1
HOMER3-204ENST00000539827 OR2A5Q96R48 311 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 FAIM2Q9BWQ8 316 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 PCED1AQ9H1Q7 454 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 ATG4BQ9Y4P1 393 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 ENTPD2Q9Y5L3 495 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 A0A1W2PR48 441 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 FAM221BA6H8Z2 402 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 P2RX6O15547 441 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 DEAF1O75398 565 aaPredicted RBP21.3■■□□□ 1
HOMER3-204ENST00000539827 ZNF888P0CJ79 500 aaPredicted RBP21.3■■□□□ 1
HOMER3-204ENST00000539827 DRD2P14416 443 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 ZNF23P17027 643 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 DDX5P17844 614 aaKnown RBP21.3■■□□□ 1
HOMER3-204ENST00000539827 CXCL12P48061 93 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 VAC14Q08AM6 782 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 HSPB3Q12988 150 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 TMEM214Q6NUQ4 689 aaKnown RBP21.3■■□□□ 1
HOMER3-204ENST00000539827 NATD1Q8N6N6 113 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 NT5CQ8TCD5 201 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 CNBD2Q96M20 576 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 NLNQ9BYT8 704 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 MAGIXQ9H6Y5 334 aa21.3■■□□□ 1
HOMER3-204ENST00000539827 SAMD4AQ9UPU9 718 aaKnown RBP21.3■■□□□ 1
HOMER3-204ENST00000539827 MAGEA13PA6NCF6 341 aa21.29■■□□□ 1
HOMER3-204ENST00000539827 UPK1AO00322 258 aa21.29■■□□□ 1
HOMER3-204ENST00000539827 TNFRSF21O75509 655 aa21.29■■□□□ 1
HOMER3-204ENST00000539827 NME1P15531 152 aaKnown RBP21.29■■□□□ 1
HOMER3-204ENST00000539827 MRPS35P82673 323 aaKnown RBP21.29■■□□□ 1
HOMER3-204ENST00000539827 DMWDQ09019 674 aa21.29■■□□□ 1
HOMER3-204ENST00000539827 VEZF1Q14119 521 aa21.29■■□□□ 1
HOMER3-204ENST00000539827 GCNT6Q5T4J0 391 aa21.29■■□□□ 1
HOMER3-204ENST00000539827 TMEM154Q6P9G4 183 aa21.29■■□□□ 1
HOMER3-204ENST00000539827 TBPL2Q6SJ96 375 aa21.29■■□□□ 1
HOMER3-204ENST00000539827 ZNF438Q7Z4V0 828 aa21.29■■□□□ 1
HOMER3-204ENST00000539827 EID3Q8N140 333 aa21.29■■□□□ 1
HOMER3-204ENST00000539827 ZCCHC7Q8N3Z6 543 aaKnown RBP21.29■■□□□ 1
HOMER3-204ENST00000539827 ZCCHC10Q8TBK6 192 aa21.29■■□□□ 1
HOMER3-204ENST00000539827 TMBIM1Q969X1 311 aa21.29■■□□□ 1
HOMER3-204ENST00000539827 SPACA7Q96KW9 195 aa21.29■■□□□ 1
HOMER3-204ENST00000539827 EPS8L2Q9H6S3 715 aa21.29■■□□□ 1
HOMER3-204ENST00000539827 PILRAQ9UKJ1 303 aa21.29■■□□□ 1
HOMER3-204ENST00000539827 SIT1Q9Y3P8 196 aa21.29■■□□□ 1
HOMER3-204ENST00000539827 ABCA7Q8IZY2 2146 aa21.29■■□□□ 1
HOMER3-204ENST00000539827 LOC105369274A0A096LPK9 316 aa21.28■■□□□ 1
HOMER3-204ENST00000539827 LOC102723532A0A0G2JNH3 316 aa21.28■■□□□ 1
HOMER3-204ENST00000539827 PGRMC2O15173 223 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms