RNA–Protein interactions for RNA: ENST00000539722.5

PRKCQ-203, Transcript of protein kinase C theta, humanhuman

TSL 2 BASIC

Gene PRKCQ, Length 3,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCQ-203ENST00000539722 LSM2Q9Y333 95 aaKnown RBP11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 DOCK1Q14185 1865 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 SSC5DA1L4H1 1573 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 H3BN98 237 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 TRIM3O75382 744 aaPredicted RBP11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 GASTP01350 101 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 CBX5P45973 191 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 SRP9P49458 86 aaKnown RBP11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 GBX2P52951 348 aaPredicted RBP11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 BCL2L1Q07817 233 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 DDX39BQ13838 428 aaKnown RBP11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 KCNC3Q14003 757 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 ZNF273Q14593 569 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 ARTNQ5T4W7 220 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 NOTUMQ6P988 496 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 SHFQ7M4L6 423 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 OR7D4Q8NG98 312 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 TM9SF4Q92544 642 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 SMAD5Q99717 465 aaKnown RBP11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 PIGUQ9H490 435 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 PPP1R3EQ9H7J1 279 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 BRD7Q9NPI1 651 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 LAMA3Q16787 3333 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 TMEM229AB2RXF0 380 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 H3BRB1 525 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 IFNA7P01567 189 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 FGF1P05230 155 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 NUP62P37198 522 aaPredicted RBP11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 PNPLA4P41247 253 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 ARHGDIBP52566 201 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 CXCL9Q07325 125 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 GPR176Q14439 515 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 PCBP2Q15366 365 aaKnown RBP eCLIP11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 MICAQ29983 383 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 TTLL9Q3SXZ7 439 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 ZNF628Q5EBL2 1059 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 CCNJQ5T5M9 372 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 DLK2Q6UY11 383 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 RTL4Q6ZR62 310 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 TRIM69Q86WT6 500 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 TAGAPQ8N103 731 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 NAGSQ8N159 534 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 PGBD3Q8N328 593 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 STPG2Q8N412 459 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 IQCF1Q8N6M8 205 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 TMEM40Q8WWA1 233 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 FOPNLQ96NB1 174 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 SORCS2Q96PQ0 1159 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 NDUFB11Q9NX14 153 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 SLCO1C1Q9NYB5 712 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 GMEB2Q9UKD1 530 aa11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 GOLGA4Q13439 2230 aaKnown RBP11.69□□□□□ -0.54
PRKCQ-203ENST00000539722 ANXA8P13928 327 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 COX7A2P14406 83 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 HOXB9P17482 250 aaPredicted RBP11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 CRATP43155 626 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 RGRP47804 291 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 ATXN7L2Q5T6C5 722 aaPredicted RBP11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 IL20RBQ6UXL0 311 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 RASSF6Q6ZTQ3 369 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 TCEANCQ8N8B7 351 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 LSM14AQ8ND56 463 aaKnown RBP11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 GATAD2BQ8WXI9 593 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 ASB12Q8WXK4 309 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 MYO19Q96H55 970 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 KCTD7Q96MP8 289 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 TMEM43Q9BTV4 400 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 TMEM121BQ9BXQ6 578 aaPredicted RBP11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 POLR1EQ9GZS1 481 aaKnown RBP11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 MCOLN1Q9GZU1 580 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 NMUR1Q9HB89 426 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 PCDHGC4Q9Y5F7 938 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 SEC14L5O43304 696 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 NDUFA2O43678 99 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 GCM2O75603 506 aaPredicted RBP11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 CLLU1Q5K131 121 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 AFTPHQ6ULP2 937 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 GPR155Q7Z3F1 870 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 ADGRG3Q86Y34 549 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 PIAS4Q8N2W9 510 aaPredicted RBP11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 TOP6BLQ8N6T0 577 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 LINC01465Q8N7H1 131 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 C3orf58Q8NDZ4 430 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 SRFBP1Q8NEF9 429 aaKnown RBP11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 LKAAEAR1Q8TD35 194 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 IGSF8Q969P0 613 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 SMARCD1Q96GM5 515 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 SENP5Q96HI0 755 aaPredicted RBP11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 CXorf58Q96LI9 332 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 DOHHQ9BU89 302 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 CIPCQ9C0C6 399 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 SPATC1LQ9H0A9 340 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 SAP130Q9H0E3 1048 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 CCSER2Q9H7U1 834 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 TLR8Q9NR97 1041 aaKnown RBP11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 LATS2Q9NRM7 1088 aa11.68□□□□□ -0.54
PRKCQ-203ENST00000539722 CASTOR2A6NHX0 329 aa11.67□□□□□ -0.54
PRKCQ-203ENST00000539722 GABRR3A8MPY1 467 aa11.67□□□□□ -0.54
PRKCQ-203ENST00000539722 KPNA5O15131 536 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms