RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 CHRDQ9H2X0 955 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 PCDHB11Q9Y5F2 797 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 GPC6Q9Y625 555 aaPredicted RBP16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 HEATR5BQ9P2D3 2071 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 LCMT2O60294 686 aaKnown RBP16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 CNOT3O75175 753 aaKnown RBP16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 S100A3P33764 101 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 CSNK1G2P78368 415 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 PWP1Q13610 501 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 ADCK2Q7Z695 626 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 IGFN1Q86VF2 1251 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 SCAIQ8N9R8 606 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 OR7A2PQ8NGA2 310 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 WDR48Q8TAF3 677 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 LCN9Q8WX39 176 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 TESCQ96BS2 214 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 CXorf40BQ96DE9 158 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 KLHDC7BQ96G42 594 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 RDH12Q96NR8 316 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 CGREF1Q99674 301 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 GPR27Q9NS67 375 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 FAM118AQ9NWS6 357 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 VAPAQ9P0L0 249 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 NEUROG3Q9Y4Z2 214 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 PCDHGA8Q9Y5G5 932 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 C19orf67A6NJJ6 358 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 G3V2T6 193 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 DFNA5O60443 496 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 PRPS1L1P21108 318 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 RPS3AP61247 264 aaKnown RBP16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 BCL2A1Q16548 175 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 UGT8Q16880 541 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 TRIM16LQ309B1 348 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 DNAJC14Q6Y2X3 702 aaPredicted RBP16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 COMMD6Q7Z4G1 85 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 ANKRD46Q86W74 232 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 MAFAQ8NHW3 353 aaPredicted RBP16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 GPBAR1Q8TDU6 330 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 CLDN23Q96B33 292 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 SDCCAG3Q96C92 435 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 SMURF2Q9HAU4 748 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 GIN1Q9NXP7 522 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 WARS2Q9UGM6 360 aaKnown RBP16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 GNG14A0A1W2PPG7 69 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 ANKDD1BA6NHY2 528 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 PCDH7O60245 1069 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 HTR1AP08908 422 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 CXCR2P25025 360 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 TIA1P31483 386 aaKnown RBP eCLIP16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 IST1P53990 364 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 REEP5Q00765 189 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 C1orf61Q13536 156 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 HKDC1Q2TB90 917 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 C6orf141Q5SZD1 244 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 OR4F3Q6IEY1 312 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 AMIGO1Q86WK6 493 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 FBXL6Q8N531 539 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 FAM86B1Q8N7N1 296 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 CHDHQ8NE62 594 aaPredicted RBP16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 TAMM41Q96BW9 452 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 MBOAT4Q96T53 435 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 SORBS1Q9BX66 1292 aaKnown RBP16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 RHBGQ9H310 441 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 SLC6A13Q9NSD5 602 aa16.29■□□□□ 0.2
PCDHB17P-201ENST00000539533 METTL12A8MUP2 240 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 OR1F1O43749 312 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 GMNNO75496 209 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 PTX3P26022 381 aaPredicted RBP16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 NDUFS1P28331 727 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 NUDT1P36639 197 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 TPD52P55327 224 aaPredicted RBP16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 SPCS2Q15005 226 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 FKBP10Q96AY3 582 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 FUNDC2Q9BWH2 189 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 MRPS30Q9NP92 439 aaKnown RBP16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 SERHLQ9NQF3 203 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 SLC25A37Q9NYZ2 338 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 TAAR2Q9P1P5 351 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 BTBD3Q9Y2F9 522 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 KLHL20Q9Y2M5 609 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 TDRD6O60522 2096 aaKnown RBP16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 MUC3AQ02505 3323 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 OXSR1O95747 527 aaPredicted RBP16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 WNT1P04628 370 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 PIGAP37287 484 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 GABARAPL2P60520 117 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 AQP6Q13520 282 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 MEP1AQ16819 746 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 GTDC1Q4AE62 458 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 MSRB3Q8IXL7 192 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 METTL4Q8N3J2 472 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 ZNF555Q8NEP9 628 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 OR2L3Q8NG85 312 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 FIG4Q92562 907 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 ZNF583Q96ND8 569 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 CCDC115Q96NT0 180 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 INPP5KQ9BT40 448 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 UGT2B28Q9BY64 529 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 AMBRA1Q9C0C7 1298 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 SLC6A20Q9NP91 592 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms