RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 VMP1Q96GC9 406 aa20.73■□□□□ 0.91
SCARB1-206ENST00000539320 MAGED4Q96JG8 741 aa20.73■□□□□ 0.91
SCARB1-206ENST00000539320 F2RL3Q96RI0 385 aa20.73■□□□□ 0.91
SCARB1-206ENST00000539320 MS4A8Q9BY19 250 aa20.73■□□□□ 0.91
SCARB1-206ENST00000539320 PRM3Q9NNZ6 103 aa20.73■□□□□ 0.91
SCARB1-206ENST00000539320 OPTCQ9UBM4 332 aa20.73■□□□□ 0.91
SCARB1-206ENST00000539320 DAPP1Q9UN19 280 aa20.73■□□□□ 0.91
SCARB1-206ENST00000539320 PPIEQ9UNP9 301 aaKnown RBP20.73■□□□□ 0.91
SCARB1-206ENST00000539320 CREBBPQ92793 2442 aa20.73■□□□□ 0.91
SCARB1-206ENST00000539320 ITPR2Q14571 2701 aa20.72■□□□□ 0.91
SCARB1-206ENST00000539320 NPIPA5E9PKD4 350 aa20.72■□□□□ 0.91
SCARB1-206ENST00000539320 CCL21O00585 134 aa20.72■□□□□ 0.91
SCARB1-206ENST00000539320 WISP2O76076 250 aa20.72■□□□□ 0.91
SCARB1-206ENST00000539320 SLC7A5Q01650 507 aa20.72■□□□□ 0.91
SCARB1-206ENST00000539320 KRTCAP3Q53RY4 240 aa20.72■□□□□ 0.91
SCARB1-206ENST00000539320 MTFR2Q6P444 385 aa20.72■□□□□ 0.91
SCARB1-206ENST00000539320 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.72■□□□□ 0.91
SCARB1-206ENST00000539320 CLNKQ7Z7G1 428 aa20.72■□□□□ 0.91
SCARB1-206ENST00000539320 SRFBP1Q8NEF9 429 aaKnown RBP20.72■□□□□ 0.91
SCARB1-206ENST00000539320 ZNF473Q8WTR7 871 aaKnown RBP20.72■□□□□ 0.91
SCARB1-206ENST00000539320 NCLNQ969V3 563 aa20.72■□□□□ 0.91
SCARB1-206ENST00000539320 CCDC120Q96HB5 630 aa20.72■□□□□ 0.91
SCARB1-206ENST00000539320 KCNC2Q96PR1 638 aa20.72■□□□□ 0.91
SCARB1-206ENST00000539320 ROGDIQ9GZN7 287 aa20.72■□□□□ 0.91
SCARB1-206ENST00000539320 ZNF223Q9UK11 482 aaPredicted RBP20.72■□□□□ 0.91
SCARB1-206ENST00000539320 FBXW2Q9UKT8 454 aa20.72■□□□□ 0.91
SCARB1-206ENST00000539320 NPIPA1Q9UND3 350 aa20.72■□□□□ 0.91
SCARB1-206ENST00000539320 K7EPI3 171 aa20.71■□□□□ 0.91
SCARB1-206ENST00000539320 CYR61O00622 381 aa20.71■□□□□ 0.91
SCARB1-206ENST00000539320 ZNF24P17028 368 aa20.71■□□□□ 0.91
SCARB1-206ENST00000539320 CASP2P42575 452 aa20.71■□□□□ 0.91
SCARB1-206ENST00000539320 BMPR2Q13873 1038 aa20.71■□□□□ 0.91
SCARB1-206ENST00000539320 MED27Q6P2C8 311 aa20.71■□□□□ 0.91
SCARB1-206ENST00000539320 CCDC91Q7Z6B0 441 aa20.71■□□□□ 0.91
SCARB1-206ENST00000539320 ZNF227Q86WZ6 799 aa20.71■□□□□ 0.91
SCARB1-206ENST00000539320 SIAH3Q8IW03 269 aa20.71■□□□□ 0.91
SCARB1-206ENST00000539320 SLC34A3Q8N130 599 aa20.71■□□□□ 0.91
SCARB1-206ENST00000539320 KCTD4Q8WVF5 259 aa20.71■□□□□ 0.91
SCARB1-206ENST00000539320 ITLN2Q8WWU7 325 aaPredicted RBP20.71■□□□□ 0.91
SCARB1-206ENST00000539320 NXNL1Q96CM4 212 aa20.71■□□□□ 0.91
SCARB1-206ENST00000539320 CCDC77Q9BR77 488 aa20.71■□□□□ 0.91
SCARB1-206ENST00000539320 LYRM4Q9HD34 91 aa20.71■□□□□ 0.91
SCARB1-206ENST00000539320 ZDHHC18Q9NUE0 388 aa20.71■□□□□ 0.91
SCARB1-206ENST00000539320 ACOT9Q9Y305 439 aa20.71■□□□□ 0.91
SCARB1-206ENST00000539320 MYO9AB2RTY4 2548 aa20.7■□□□□ 0.9
SCARB1-206ENST00000539320 A0A087X1B8 175 aa20.7■□□□□ 0.9
SCARB1-206ENST00000539320 SYCE1LA8MT33 242 aa20.7■□□□□ 0.9
SCARB1-206ENST00000539320 PRSS44E7EML9 344 aa20.7■□□□□ 0.9
SCARB1-206ENST00000539320 PCNAP12004 261 aa20.7■□□□□ 0.9
SCARB1-206ENST00000539320 SERPINB1P30740 379 aa20.7■□□□□ 0.9
SCARB1-206ENST00000539320 IRF9Q00978 393 aa20.7■□□□□ 0.9
SCARB1-206ENST00000539320 ELAVL1Q15717 326 aaKnown RBP20.7■□□□□ 0.9
SCARB1-206ENST00000539320 C3AR1Q16581 482 aa20.7■□□□□ 0.9
SCARB1-206ENST00000539320 RPTNQ6XPR3 784 aa20.7■□□□□ 0.9
SCARB1-206ENST00000539320 ZNF793Q6ZN11 406 aa20.7■□□□□ 0.9
SCARB1-206ENST00000539320 LAS2Q8IYD9 372 aa20.7■□□□□ 0.9
SCARB1-206ENST00000539320 CENPLQ8N0S6 344 aaPredicted RBP20.7■□□□□ 0.9
SCARB1-206ENST00000539320 TBCDQ9BTW9 1192 aa20.7■□□□□ 0.9
SCARB1-206ENST00000539320 PRDM7Q9NQW5 492 aa20.7■□□□□ 0.9
SCARB1-206ENST00000539320 ENTPD4Q9Y227 616 aa20.7■□□□□ 0.9
SCARB1-206ENST00000539320 KLF13Q9Y2Y9 288 aaPredicted RBP20.7■□□□□ 0.9
SCARB1-206ENST00000539320 ITGA10O75578 1167 aa20.69■□□□□ 0.9
SCARB1-206ENST00000539320 SCELO95171 688 aa20.69■□□□□ 0.9
SCARB1-206ENST00000539320 IFNA16P05015 189 aa20.69■□□□□ 0.9
SCARB1-206ENST00000539320 ATP5A1P25705 553 aaKnown RBP20.69■□□□□ 0.9
SCARB1-206ENST00000539320 GPR143P51810 404 aa20.69■□□□□ 0.9
SCARB1-206ENST00000539320 PCDH1Q08174 1060 aa20.69■□□□□ 0.9
SCARB1-206ENST00000539320 NAA30Q147X3 362 aaPredicted RBP20.69■□□□□ 0.9
SCARB1-206ENST00000539320 FAM83EQ2M2I3 478 aa20.69■□□□□ 0.9
SCARB1-206ENST00000539320 TMEM35AQ53FP2 167 aa20.69■□□□□ 0.9
SCARB1-206ENST00000539320 MROH9Q5TGP6 573 aa20.69■□□□□ 0.9
SCARB1-206ENST00000539320 GRHL2Q6ISB3 625 aa20.69■□□□□ 0.9
SCARB1-206ENST00000539320 UBE3DQ7Z6J8 389 aa20.69■□□□□ 0.9
SCARB1-206ENST00000539320 CYP4Z2PQ8N1L4 340 aa20.69■□□□□ 0.9
SCARB1-206ENST00000539320 TMEM132CQ8N3T6 1108 aa20.69■□□□□ 0.9
SCARB1-206ENST00000539320 ZNF808Q8N4W9 903 aaPredicted RBP20.69■□□□□ 0.9
SCARB1-206ENST00000539320 TMEM156Q8N614 296 aa20.69■□□□□ 0.9
SCARB1-206ENST00000539320 CPSF7Q8N684 471 aaKnown RBP20.69■□□□□ 0.9
SCARB1-206ENST00000539320 POGLUT1Q8NBL1 392 aa20.69■□□□□ 0.9
SCARB1-206ENST00000539320 RHEBL1Q8TAI7 183 aa20.69■□□□□ 0.9
SCARB1-206ENST00000539320 MRRFQ96E11 262 aaKnown RBP20.69■□□□□ 0.9
SCARB1-206ENST00000539320 LRRC1Q9BTT6 524 aa20.69■□□□□ 0.9
SCARB1-206ENST00000539320 SNX15Q9NRS6 342 aa20.69■□□□□ 0.9
SCARB1-206ENST00000539320 TINAGQ9UJW2 476 aa20.69■□□□□ 0.9
SCARB1-206ENST00000539320 CCDC189A1A4V9 331 aa20.68■□□□□ 0.9
SCARB1-206ENST00000539320 RTCAO00442 366 aaKnown RBP20.68■□□□□ 0.9
SCARB1-206ENST00000539320 CTNSO60931 367 aa20.68■□□□□ 0.9
SCARB1-206ENST00000539320 ZFAND5O76080 213 aa20.68■□□□□ 0.9
SCARB1-206ENST00000539320 C2P06681 752 aa20.68■□□□□ 0.9
SCARB1-206ENST00000539320 MTHFD2P13995 350 aa20.68■□□□□ 0.9
SCARB1-206ENST00000539320 SSR2P43308 183 aa20.68■□□□□ 0.9
SCARB1-206ENST00000539320 MEOX1P50221 254 aa20.68■□□□□ 0.9
SCARB1-206ENST00000539320 STX4Q12846 297 aa20.68■□□□□ 0.9
SCARB1-206ENST00000539320 ART3Q13508 389 aa20.68■□□□□ 0.9
SCARB1-206ENST00000539320 UAP1Q16222 522 aaPredicted RBP20.68■□□□□ 0.9
SCARB1-206ENST00000539320 Q6ZPB1 254 aaPredicted RBP20.68■□□□□ 0.9
SCARB1-206ENST00000539320 GHDCQ8N2G8 530 aa20.68■□□□□ 0.9
SCARB1-206ENST00000539320 ACOT4Q8N9L9 421 aa20.68■□□□□ 0.9
SCARB1-206ENST00000539320 OR7G3Q8NG95 312 aa20.68■□□□□ 0.9
SCARB1-206ENST00000539320 DAZLQ92904 295 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms