RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 SLC28A1O00337 649 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 SMAD6O43541 496 aaKnown RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 LCMT2O60294 686 aaKnown RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 TBX19O60806 448 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 CABYRO75952 493 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 SCGNO76038 276 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 ALPPP05187 535 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 ALPPL2P10696 532 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 F3P13726 295 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 HOXB6P17509 224 aaKnown RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 AOC1P19801 751 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 AADACP22760 399 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 CMA1P23946 247 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 OTX1P32242 354 aaPredicted RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 NPBWR1P48145 328 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 THBS3P49746 956 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 PPT1P50897 306 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 ATXN3P54252 364 aaPredicted RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 KCNJ10P78508 379 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 LRRC74AQ0VAA2 488 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 TAF10Q12962 218 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 PTK6Q13882 451 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 VEZF1Q14119 521 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 RCN2Q14257 317 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 PDIA5Q14554 519 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 TMEM132DQ14C87 1099 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 ZKSCAN8Q15776 578 aaPredicted RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 SGCBQ16585 318 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 MTX3Q5HYI7 312 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 FAM166AQ6J272 317 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 WASH2PQ6VEQ5 465 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 CEACAM19Q7Z692 300 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 ADAMTSL2Q86TH1 951 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 GRAMD2AQ8IUY3 354 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 SAMD14Q8IZD0 417 aaPredicted RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 RNF148Q8N7C7 305 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 NANOGP1Q8N7R0 232 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 ADAD2Q8NCV1 583 aaKnown RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 UTP15Q8TED0 518 aaKnown RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 SSMEM1Q8WWF3 244 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 GTF3AQ92664 365 aaKnown RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 NEUROG1Q92886 237 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 SLC47A1Q96FL8 570 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 COQ2Q96H96 371 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 TXNDC15Q96J42 360 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 PRAC1Q96KF2 57 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 CNDP1Q96KN2 507 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 CEP170P1Q96L14 293 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 MYCBPQ99417 103 aaPredicted RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 KXD1Q9BQD3 176 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 TLE6Q9H808 572 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 NMUR1Q9HB89 426 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 STAU2Q9NUL3 570 aaKnown RBP eCLIP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 NDUFA13Q9P0J0 144 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 PSORS1C1Q9UIG5 152 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 HOOK1Q9UJC3 728 aaKnown RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 CPSF3Q9UKF6 684 aaKnown RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 ITGA11Q9UKX5 1188 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 RASD1Q9Y272 281 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 PTPRTO14522 1441 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 MROH5Q6ZUA9 1318 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 BCL9LQ86UU0 1499 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 LAMB4A4D0S4 1761 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 TAF1LQ8IZX4 1826 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 LOC101059948A0A1B0GTJ6 334 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 HYKKA2RU49 373 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 ARHGAP42A6NI28 874 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 KRTAP29-1A8MX34 341 aaPredicted RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 TLR4O00206 839 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 PPIP5K2O43314 1243 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 ITM2AO43736 263 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 TOXO94900 526 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 SLITRK3O94933 977 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 NUDT3O95989 172 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 OPN1LWP04000 364 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 CYP1A2P05177 515 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 ERVK-10P10266 1014 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 UROSP10746 265 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 AREGP15514 252 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 UGT1A6P19224 532 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 HSPA4P34932 840 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 OR1D2P34982 312 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 ELK3P41970 407 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 PITPNBP48739 271 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 ACADVLP49748 655 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 MTCP1P56278 107 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 TAS2R39P59534 338 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 FKBP1BP68106 108 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 SP3Q02447 781 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 SNX1Q13596 522 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 PTGR1Q14914 329 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 CTF1Q16619 201 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 ITPRIPL2Q3MIP1 535 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 FGD3Q5JSP0 725 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 DCAF10Q5QP82 559 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 ZYG11AQ6WRX3 759 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 NLRP9Q7RTR0 991 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 ASPGQ86U10 573 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 C17orf82Q86X59 251 aaPredicted RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 FBXL14Q8N1E6 418 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms