RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 DGKBQ9Y6T7 804 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 XIRP2A4UGR9 3374 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 SNRNP200O75643 2136 aaKnown RBP13.35□□□□□ -0.27
LIMK1-208ENST00000538333 TICRRQ7Z2Z1 1910 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 TNFRSF11BO00300 401 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 TMPRSS11DO60235 418 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 LCMT2O60294 686 aaKnown RBP13.35□□□□□ -0.27
LIMK1-208ENST00000538333 RECKO95980 971 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 CEACAM5P06731 702 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 CCNA2P20248 432 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 CALRP27797 417 aaKnown RBP13.35□□□□□ -0.27
LIMK1-208ENST00000538333 TIE1P35590 1138 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 GP2P55259 537 aaKnown RBP13.35□□□□□ -0.27
LIMK1-208ENST00000538333 PCBP4P57723 403 aaKnown RBP13.35□□□□□ -0.27
LIMK1-208ENST00000538333 RPP38P78345 283 aaKnown RBP13.35□□□□□ -0.27
LIMK1-208ENST00000538333 EMX1Q04741 257 aaPredicted RBP13.35□□□□□ -0.27
LIMK1-208ENST00000538333 SAXO2Q658L1 398 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 ZNF776Q68DI1 518 aaPredicted RBP13.35□□□□□ -0.27
LIMK1-208ENST00000538333 KIAA1211LQ6NV74 962 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 OR2A1Q8NGT9 310 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 FAR1Q8WVX9 515 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 OR5P2Q8WZ92 322 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 LZICQ8WZA0 190 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 NEURL3Q96EH8 262 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 ZNF764Q96H86 408 aaPredicted RBP13.35□□□□□ -0.27
LIMK1-208ENST00000538333 HRASLS5Q96KN8 279 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 FERD3LQ96RJ6 166 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 MKRN2Q9H000 416 aaKnown RBP13.35□□□□□ -0.27
LIMK1-208ENST00000538333 BTBD1Q9H0C5 482 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 OSGEPL1Q9H4B0 414 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 SLC17A4Q9Y2C5 497 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 MYO9BQ13459 2157 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 PRAMEF33A0A0G2JMD5 474 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 NDUFS4O43181 175 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 PRAMEF10O60809 474 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 NOL3O60936 208 aaKnown RBP13.34□□□□□ -0.27
LIMK1-208ENST00000538333 INMTO95050 263 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 ACVR2AP27037 513 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 PXNP49023 591 aaPredicted RBP13.34□□□□□ -0.27
LIMK1-208ENST00000538333 RAB28P51157 221 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 GALK1P51570 392 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 MAPK10P53779 464 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 DSTNP60981 165 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 RPS21P63220 83 aaKnown RBP13.34□□□□□ -0.27
LIMK1-208ENST00000538333 PRDX1Q06830 199 aaKnown RBP13.34□□□□□ -0.27
LIMK1-208ENST00000538333 CLCA4Q14CN2 919 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 HEPACAMQ14CZ8 416 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 ANKRD54Q6NXT1 300 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 SLC16A12Q6ZSM3 486 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 NATD1Q8N6N6 113 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 CREB3L4Q8TEY5 395 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 GIPC3Q8TF64 312 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 TANKQ92844 425 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 PDXPQ96GD0 296 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 CAMK1GQ96NX5 476 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 FEVQ99581 238 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 NLNQ9BYT8 704 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 AICDAQ9GZX7 198 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 ERVK-18Q9QC07 812 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 ADAM29Q9UKF5 820 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 KCNK6Q9Y257 313 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 ANGPT4Q9Y264 503 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.34□□□□□ -0.27
LIMK1-208ENST00000538333 ZNF451Q9Y4E5 1061 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 PCDHGA6Q9Y5G7 932 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 PDPK1O15530 556 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 PLRG1O43660 514 aaKnown RBP13.34□□□□□ -0.27
LIMK1-208ENST00000538333 OR1F1O43749 312 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 PCDHGA12O60330 932 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 WBP4O75554 376 aaKnown RBP13.34□□□□□ -0.27
LIMK1-208ENST00000538333 LAMP2P13473 410 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 HTR1BP28222 390 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 IGFALSP35858 605 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 TNFRSF4P43489 277 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 SEC13P55735 322 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 SMN1Q16637 294 aaKnown RBP13.34□□□□□ -0.27
LIMK1-208ENST00000538333 PROX2Q3B8N5 592 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 ZNF605Q86T29 641 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 NUDT13Q86X67 352 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 SLC30A8Q8IWU4 369 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 AMER3Q8N944 861 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 GEMIN6Q8WXD5 167 aaKnown RBP13.34□□□□□ -0.27
LIMK1-208ENST00000538333 UBE2FQ969M7 185 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 RGMAQ96B86 450 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 QRFPRQ96P65 431 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 FUNDC2Q9BWH2 189 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 DGCR6LQ9BY27 220 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 XKR8Q9H6D3 395 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 DDX31Q9H8H2 851 aaKnown RBP13.34□□□□□ -0.27
LIMK1-208ENST00000538333 NEUROD4Q9HD90 331 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 SIRT3Q9NTG7 399 aaPredicted RBP13.34□□□□□ -0.27
LIMK1-208ENST00000538333 TEX10Q9NXF1 929 aaPredicted RBP13.34□□□□□ -0.27
LIMK1-208ENST00000538333 FBXL12Q9NXK8 326 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 C5AR2Q9P296 337 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 TPRKBQ9Y3C4 175 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 PLEKHM1Q9Y4G2 1056 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 PCDHGA10Q9Y5H3 936 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 SNX8Q9Y5X2 465 aa13.34□□□□□ -0.27
LIMK1-208ENST00000538333 A0A1W2PQU0 124 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 B4GALT2O60909 372 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms