RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 ACOT4Q8N9L9 421 aa16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 TMEM52Q8NDY8 209 aa16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 HUS1BQ8NHY5 278 aa16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 WDR20Q8TBZ3 569 aa16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 NTMT1Q9BV86 223 aa16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 C1QTNF3Q9BXJ4 246 aa16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 ACTR8Q9H981 624 aa16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 COPS7BQ9H9Q2 264 aaPredicted RBP16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 KCNK13Q9HB14 408 aa16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 DMRT3Q9NQL9 472 aa16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 AGPAT4Q9NRZ5 378 aa16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 PLA2G3Q9NZ20 509 aa16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 PCTPQ9UKL6 214 aa16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 PCDHGB6Q9Y5F9 930 aa16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 BLACEA4D250 179 aa16.1■□□□□ 0.17
SFSWAP-205ENST00000537164 TGFBR3LH3BV60 316 aa16.1■□□□□ 0.17
SFSWAP-205ENST00000537164 OR7A17O14581 309 aa16.1■□□□□ 0.17
SFSWAP-205ENST00000537164 SMIM24O75264 130 aa16.1■□□□□ 0.17
SFSWAP-205ENST00000537164 TGFB1P01137 390 aa16.1■□□□□ 0.17
SFSWAP-205ENST00000537164 MYBL2P10244 700 aa16.1■□□□□ 0.17
SFSWAP-205ENST00000537164 PCNAP12004 261 aa16.1■□□□□ 0.17
SFSWAP-205ENST00000537164 HIST1H1TP22492 207 aaPredicted RBP16.1■□□□□ 0.17
SFSWAP-205ENST00000537164 EEF1DP29692 281 aaKnown RBP16.1■□□□□ 0.17
SFSWAP-205ENST00000537164 HNRNPFP52597 415 aaKnown RBP16.1■□□□□ 0.17
SFSWAP-205ENST00000537164 ZNF33BQ06732 778 aa16.1■□□□□ 0.17
SFSWAP-205ENST00000537164 MEP1AQ16819 746 aa16.1■□□□□ 0.17
SFSWAP-205ENST00000537164 CRLF3Q8IUI8 442 aa16.1■□□□□ 0.17
SFSWAP-205ENST00000537164 FAM26EQ8N5C1 309 aa16.1■□□□□ 0.17
SFSWAP-205ENST00000537164 OR1N1Q8NGS0 311 aa16.1■□□□□ 0.17
SFSWAP-205ENST00000537164 REPS1Q96D71 796 aa16.1■□□□□ 0.17
SFSWAP-205ENST00000537164 PHF21BQ96EK2 531 aa16.1■□□□□ 0.17
SFSWAP-205ENST00000537164 ZBTB26Q9HCK0 441 aa16.1■□□□□ 0.17
SFSWAP-205ENST00000537164 PRTFDC1Q9NRG1 225 aa16.1■□□□□ 0.17
SFSWAP-205ENST00000537164 SPTAN1Q13813 2472 aaKnown RBP16.1■□□□□ 0.17
SFSWAP-205ENST00000537164 A8MUI8 341 aa16.09■□□□□ 0.17
SFSWAP-205ENST00000537164 FOXE1O00358 373 aaPredicted RBP16.09■□□□□ 0.17
SFSWAP-205ENST00000537164 CTNSO60931 367 aa16.09■□□□□ 0.17
SFSWAP-205ENST00000537164 CLDN9O95484 217 aa16.09■□□□□ 0.17
SFSWAP-205ENST00000537164 UQCRHP07919 91 aa16.09■□□□□ 0.17
SFSWAP-205ENST00000537164 RPS17P08708 135 aaKnown RBP16.09■□□□□ 0.17
SFSWAP-205ENST00000537164 PTX3P26022 381 aaPredicted RBP16.09■□□□□ 0.17
SFSWAP-205ENST00000537164 GPR143P51810 404 aa16.09■□□□□ 0.17
SFSWAP-205ENST00000537164 CUL3Q13618 768 aa16.09■□□□□ 0.17
SFSWAP-205ENST00000537164 AP5B1Q2VPB7 878 aa16.09■□□□□ 0.17
SFSWAP-205ENST00000537164 C10orf62Q5T681 223 aaPredicted RBP16.09■□□□□ 0.17
SFSWAP-205ENST00000537164 ZNF324BQ6AW86 544 aaPredicted RBP16.09■□□□□ 0.17
SFSWAP-205ENST00000537164 OR4C11Q6IEV9 310 aa16.09■□□□□ 0.17
SFSWAP-205ENST00000537164 SLC5A8Q8N695 610 aa16.09■□□□□ 0.17
SFSWAP-205ENST00000537164 APCDD1LQ8NCL9 501 aa16.09■□□□□ 0.17
SFSWAP-205ENST00000537164 OR52B6Q8NGF0 335 aa16.09■□□□□ 0.17
SFSWAP-205ENST00000537164 ACMSDQ8TDX5 336 aa16.09■□□□□ 0.17
SFSWAP-205ENST00000537164 MZB1Q8WU39 189 aa16.09■□□□□ 0.17
SFSWAP-205ENST00000537164 FAR1Q8WVX9 515 aa16.09■□□□□ 0.17
SFSWAP-205ENST00000537164 SCYL1Q96KG9 808 aa16.09■□□□□ 0.17
SFSWAP-205ENST00000537164 CSF3RQ99062 836 aa16.09■□□□□ 0.17
SFSWAP-205ENST00000537164 OR51B5Q9H339 312 aa16.09■□□□□ 0.17
SFSWAP-205ENST00000537164 NOL11Q9H8H0 719 aaKnown RBP16.09■□□□□ 0.17
SFSWAP-205ENST00000537164 PSMC3IPQ9P2W1 217 aaPredicted RBP16.09■□□□□ 0.17
SFSWAP-205ENST00000537164 RNF11Q9Y3C5 154 aa16.09■□□□□ 0.17
SFSWAP-205ENST00000537164 IQANK1A0A1B0GTG1 560 aa16.08■□□□□ 0.16
SFSWAP-205ENST00000537164 RTCAO00442 366 aaKnown RBP16.08■□□□□ 0.16
SFSWAP-205ENST00000537164 PLPP1O14494 284 aa16.08■□□□□ 0.16
SFSWAP-205ENST00000537164 TAS2R50P59544 299 aa16.08■□□□□ 0.16
SFSWAP-205ENST00000537164 TRAF3Q13114 568 aa16.08■□□□□ 0.16
SFSWAP-205ENST00000537164 NR6A1Q15406 480 aa16.08■□□□□ 0.16
SFSWAP-205ENST00000537164 CPSF6Q16630 551 aaKnown RBP eCLIP16.08■□□□□ 0.16
SFSWAP-205ENST00000537164 GGTA1PQ4G0N0 100 aa16.08■□□□□ 0.16
SFSWAP-205ENST00000537164 BEST3Q8N1M1 668 aa16.08■□□□□ 0.16
SFSWAP-205ENST00000537164 ZCCHC7Q8N3Z6 543 aaKnown RBP16.08■□□□□ 0.16
SFSWAP-205ENST00000537164 RNF175Q8N4F7 328 aa16.08■□□□□ 0.16
SFSWAP-205ENST00000537164 FAM47BQ8NA70 645 aa16.08■□□□□ 0.16
SFSWAP-205ENST00000537164 ST6GALNAC3Q8NDV1 305 aa16.08■□□□□ 0.16
SFSWAP-205ENST00000537164 C7orf57Q8NEG2 295 aa16.08■□□□□ 0.16
SFSWAP-205ENST00000537164 B3GNT7Q8NFL0 401 aa16.08■□□□□ 0.16
SFSWAP-205ENST00000537164 GRHL3Q8TE85 626 aa16.08■□□□□ 0.16
SFSWAP-205ENST00000537164 RGMAQ96B86 450 aa16.08■□□□□ 0.16
SFSWAP-205ENST00000537164 MTERF1Q99551 399 aaKnown RBP16.08■□□□□ 0.16
SFSWAP-205ENST00000537164 MAPKAP1Q9BPZ7 522 aa16.08■□□□□ 0.16
SFSWAP-205ENST00000537164 SLX1AQ9BQ83 275 aa16.08■□□□□ 0.16
SFSWAP-205ENST00000537164 ZNF717Q9BY31 904 aaPredicted RBP16.08■□□□□ 0.16
SFSWAP-205ENST00000537164 ADAP2Q9NPF8 381 aa16.08■□□□□ 0.16
SFSWAP-205ENST00000537164 MS4A12Q9NXJ0 267 aa16.08■□□□□ 0.16
SFSWAP-205ENST00000537164 MAP10Q9P2G4 905 aa16.08■□□□□ 0.16
SFSWAP-205ENST00000537164 VTI1BQ9UEU0 232 aa16.08■□□□□ 0.16
SFSWAP-205ENST00000537164 SVILO95425 2214 aa16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 A8MT66 165 aa16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 PRAMEF2O60811 474 aa16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 SSR2P43308 183 aa16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 CCNG1P51959 295 aa16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 RPS13P62277 151 aaKnown RBP16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 PHEXP78562 749 aa16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 SLC13A2Q13183 592 aa16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 MRPL49Q13405 166 aaKnown RBP16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 TUBA3CQ13748 450 aa16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 ZRSR2Q15696 482 aaKnown RBP16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 ELAVL1Q15717 326 aaKnown RBP16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 FCRLBQ6BAA4 426 aa16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 TUBA3EQ6PEY2 450 aa16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 RPS19BP1Q86WX3 136 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms