RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 MYLK4Q86YV6 388 aaPredicted RBP13.34□□□□□ -0.27
RTN3P1-201ENST00000536295 ZNF595Q8IYB9 648 aa13.34□□□□□ -0.27
RTN3P1-201ENST00000536295 CENPLQ8N0S6 344 aaPredicted RBP13.34□□□□□ -0.27
RTN3P1-201ENST00000536295 TEX9Q8N6V9 391 aa13.34□□□□□ -0.27
RTN3P1-201ENST00000536295 APCDD1LQ8NCL9 501 aa13.34□□□□□ -0.27
RTN3P1-201ENST00000536295 NCLNQ969V3 563 aa13.34□□□□□ -0.27
RTN3P1-201ENST00000536295 RELTQ969Z4 430 aa13.34□□□□□ -0.27
RTN3P1-201ENST00000536295 FRMD6Q96NE9 622 aa13.34□□□□□ -0.27
RTN3P1-201ENST00000536295 KCNC2Q96PR1 638 aa13.34□□□□□ -0.27
RTN3P1-201ENST00000536295 PRDM7Q9NQW5 492 aa13.34□□□□□ -0.27
RTN3P1-201ENST00000536295 SNX15Q9NRS6 342 aa13.34□□□□□ -0.27
RTN3P1-201ENST00000536295 NINJ2Q9NZG7 142 aa13.34□□□□□ -0.27
RTN3P1-201ENST00000536295 DAPP1Q9UN19 280 aa13.34□□□□□ -0.27
RTN3P1-201ENST00000536295 NPIPA1Q9UND3 350 aa13.34□□□□□ -0.27
RTN3P1-201ENST00000536295 ANGPTL3Q9Y5C1 460 aa13.34□□□□□ -0.27
RTN3P1-201ENST00000536295 CLDN16Q9Y5I7 305 aa13.34□□□□□ -0.27
RTN3P1-201ENST00000536295 HMX2A2RU54 273 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 ASPDHA6ND91 283 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 SYCE1LA8MT33 242 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 CYR61O00622 381 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 NME2P1O60361 137 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 GFAPP14136 432 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 EPB42P16452 691 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 NME2P22392 152 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 PHBP35232 272 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 CASP2P42575 452 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 STX4Q12846 297 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 DDX39BQ13838 428 aaKnown RBP13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 RCN2Q14257 317 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 FAM83EQ2M2I3 478 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 ZNF793Q6ZN11 406 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 UBE3DQ7Z6J8 389 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 RNF175Q8N4F7 328 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 CPSF7Q8N684 471 aaKnown RBP13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 ZNF473Q8WTR7 871 aaKnown RBP13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 UBTD2Q8WUN7 234 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 UBE2E3Q969T4 207 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 TMEM125Q96AQ2 219 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 VMP1Q96GC9 406 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 MAGED4Q96JG8 741 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 GPR137Q96N19 417 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 MAPKAP1Q9BPZ7 522 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 CCDC77Q9BR77 488 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 MS4A8Q9BY19 250 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 ROGDIQ9GZN7 287 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 LIN28AQ9H9Z2 209 aaKnown RBP13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 ADAP2Q9NPF8 381 aa13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 SUCOQ9UBS9 1254 aaKnown RBP13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 ZNF223Q9UK11 482 aaPredicted RBP13.33□□□□□ -0.28
RTN3P1-201ENST00000536295 A0A096LPK6 155 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 LRRC14BA6NHZ5 514 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 ZNHIT1O43257 154 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 PRKNO60260 465 aaPredicted RBP13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 SLC19A2O60779 497 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 LDB3O75112 727 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 ITGA10O75578 1167 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 MLYCDO95822 493 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 MTHFD2P13995 350 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 ATP5A1P25705 553 aaKnown RBP13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 TYK2P29597 1187 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 TRHRP34981 398 aaPredicted RBP13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 CA7P43166 264 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 SSR2P43308 183 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 SERPINB8P50452 374 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 HLCSP50747 726 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 CASP6P55212 293 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 ID2Q02363 134 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 TERF2Q15554 542 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 PFKFB4Q16877 469 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 WHAMMP3Q1A5X7 153 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 AP5B1Q2VPB7 878 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 GRHL2Q6ISB3 625 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 C16orf47Q6ZP98 133 aaPredicted RBP13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 CHSY3Q70JA7 882 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 ZNF227Q86WZ6 799 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 LAS2Q8IYD9 372 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 TMEM156Q8N614 296 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 ACOT4Q8N9L9 421 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 SRFBP1Q8NEF9 429 aaKnown RBP13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 OR7G3Q8NG95 312 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 CCDC120Q96HB5 630 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 TBCDQ9BTW9 1192 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 SORBS1Q9BX66 1292 aaKnown RBP13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 ALOXE3Q9BYJ1 711 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 VPS11Q9H270 941 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 OR51B5Q9H339 312 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 KCMF1Q9P0J7 381 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 CPSF2Q9P2I0 782 aaKnown RBP13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 MTRF1LQ9UGC7 380 aaKnown RBP13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 TINAGQ9UJW2 476 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 CLCA3PQ9Y6N3 262 aa13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 DIDO1Q9BTC0 2240 aaKnown RBP13.32□□□□□ -0.28
RTN3P1-201ENST00000536295 PRSS44E7EML9 344 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 CTNSO60931 367 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 KLHL2O95198 593 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 ACSL3O95573 720 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 ALDOAP04075 364 aaKnown RBP13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 ZNF24P17028 368 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 TNNI3P19429 210 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 HIST1H1TP22492 207 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms