RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 HS3ST3B1Q9Y662 390 aa12.77□□□□□ -0.37
RPAIN-205ENST00000536255 SPACA6W5XKT8 324 aa12.77□□□□□ -0.37
RPAIN-205ENST00000536255 IDSB3KWA1 339 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 C4orf51C9J302 202 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 SOCS6O14544 535 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 UBFD1O14562 309 aaKnown RBP12.76□□□□□ -0.37
RPAIN-205ENST00000536255 SNUPNO95149 360 aaKnown RBP12.76□□□□□ -0.37
RPAIN-205ENST00000536255 SCELO95171 688 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 CHEK2O96017 543 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 B3GALT4O96024 378 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 PDGFAP04085 211 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 SERPINE1P05121 402 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 FHP07954 510 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 UROSP10746 265 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 HIST1H1TP22492 207 aaPredicted RBP12.76□□□□□ -0.37
RPAIN-205ENST00000536255 GRK2P25098 689 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 ATP5A1P25705 553 aaKnown RBP12.76□□□□□ -0.37
RPAIN-205ENST00000536255 PGDP52209 483 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 EMP2P54851 167 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 OLR1P78380 273 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 CSTF3Q12996 717 aaKnown RBP12.76□□□□□ -0.37
RPAIN-205ENST00000536255 TUBB8Q3ZCM7 444 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 MINDY4Q4G0A6 757 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 KIRREL2Q6UWL6 708 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 ASB18Q6ZVZ8 466 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 PAGE2Q7Z2X7 111 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 PRICKLE2Q7Z3G6 844 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 CUZD1Q86UP6 607 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 CA13Q8N1Q1 262 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 RNF175Q8N4F7 328 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 ACOT4Q8N9L9 421 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 OR5T3Q8NGG3 340 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 METTL21AQ8WXB1 218 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 ARL8AQ96BM9 186 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 QRFPRQ96P65 431 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 PAIP2Q9BPZ3 127 aaKnown RBP12.76□□□□□ -0.37
RPAIN-205ENST00000536255 LYRM4Q9HD34 91 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 MLXIPLQ9NP71 852 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 GPR83Q9NYM4 423 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 FBXL4Q9UKA2 621 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 MKL2Q9ULH7 1088 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 G3BP2Q9UN86 482 aaKnown RBP12.76□□□□□ -0.37
RPAIN-205ENST00000536255 SLC12A4Q9UP95 1085 aa12.76□□□□□ -0.37
RPAIN-205ENST00000536255 SERTM1A2A2V5 107 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 WDR91A4D1P6 747 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 BLACEA4D250 179 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 A6NL46 340 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 TMEM114B3SHH9 223 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 SAP18O00422 153 aaKnown RBP12.75□□□□□ -0.37
RPAIN-205ENST00000536255 PLPP1O14494 284 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 AZIN1O14977 448 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 SUV39H1O43463 412 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 SLC28A2O43868 658 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 PLA2G2AP14555 144 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 CERS1P27544 350 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 RAB38P57729 211 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 MPP2Q14168 576 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 CHI3L2Q15782 390 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 ARL13AQ5H913 290 aaPredicted RBP12.75□□□□□ -0.37
RPAIN-205ENST00000536255 CYP20A1Q6UW02 462 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 ZCCHC23Q6ZST2 131 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 UBE3DQ7Z6J8 389 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 LAPTM4BQ86VI4 370 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 NUDT13Q86X67 352 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 KIRREL3Q8IZU9 778 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 ZCCHC7Q8N3Z6 543 aaKnown RBP12.75□□□□□ -0.37
RPAIN-205ENST00000536255 FDCSPQ8NFU4 85 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 KCNA7Q96RP8 456 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 SHCBP1LQ9BZQ2 653 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 VN1R1Q9GZP7 353 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 FARSBQ9NSD9 589 aaKnown RBP12.75□□□□□ -0.37
RPAIN-205ENST00000536255 MS4A12Q9NXJ0 267 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 VPS29Q9UBQ0 182 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 C19orf25Q9UFG5 118 aaPredicted RBP12.75□□□□□ -0.37
RPAIN-205ENST00000536255 ADAM29Q9UKF5 820 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 DAPP1Q9UN19 280 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 TIMM22Q9Y584 194 aa12.75□□□□□ -0.37
RPAIN-205ENST00000536255 SCN3AQ9NY46 2000 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 ARHGAP10A1A4S6 786 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 SYNDIG1LA6NDD5 238 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 MASP2O00187 686 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 RTCAO00442 366 aaKnown RBP12.74□□□□□ -0.37
RPAIN-205ENST00000536255 CLDN4O14493 209 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 ALOX12BO75342 701 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 ETHE1O95571 254 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 FGF4P08620 206 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 C8orf89P0DMQ9 161 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 ACPPP15309 386 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 TLX1P31314 330 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-205ENST00000536255 LIM2P55344 173 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 KLRB1Q12918 225 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 AIMP2Q13155 320 aaKnown RBP12.74□□□□□ -0.37
RPAIN-205ENST00000536255 RUNX2Q13950 521 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 IMPG1Q17R60 797 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 TCHHL1Q5QJ38 904 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-205ENST00000536255 ZNF793Q6ZN11 406 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 TRIM42Q8IWZ5 723 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 CLYBLQ8N0X4 340 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 GALNT16Q8N428 558 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 C7orf57Q8NEG2 295 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms