RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 KLK4Q9Y5K2 254 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 HCFC2Q9Y5Z7 792 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 TRBC2A0A5B9 178 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 HIDE1A8MVS5 230 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 K7ESM1 405 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 POP7O75817 140 aaKnown RBP15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 PAPLNO95428 1278 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 IFNW1P05000 195 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 CBLP22681 906 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 GPR1P46091 355 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 NUDT6P53370 316 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 DSTNP60981 165 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 DNASE1L3Q13609 305 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 DHCR24Q15392 516 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 PRSS53Q2L4Q9 553 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 CYP27C1Q4G0S4 372 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 ZNF547Q8IVP9 402 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 CADM3Q8N126 398 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 KRT78Q8N1N4 520 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 LMNTD1Q8N9Z9 388 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 ZNF740Q8NDX6 193 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 PSMA8Q8TAA3 256 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 C9orf43Q8TAL5 461 aaPredicted RBP15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 PDXPQ96GD0 296 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 ZSWIM3Q96MP5 696 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 FAM129BQ96TA1 746 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 DUSP12Q9UNI6 340 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 ALPK3Q96L96 1907 aa15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 CCDC88CQ9P219 2028 aa15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 AGAP5A6NIR3 686 aa15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 SPINT1O43278 529 aa15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 CNOT3O75175 753 aaKnown RBP15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 ATP6V1G1O75348 118 aa15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 ADORA3P0DMS8 318 aa15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 POU2F1P14859 743 aa15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 EIF2DP41214 584 aaKnown RBP15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 RGS6P49758 472 aa15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 LIMK1P53667 647 aa15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 DPTQ07507 201 aa15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 DUSP7Q16829 419 aa15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 ARMCX4Q5H9R4 360 aa15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 RAET1GQ6H3X3 334 aa15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 FRMPD2BQ6IN97 320 aa15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 NATD1Q8N6N6 113 aa15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 B3GNT7Q8NFL0 401 aa15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 KBTBD8Q8NFY9 601 aa15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 OR2L2Q8NH16 312 aa15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 WFIKKN2Q8TEU8 576 aa15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 RAD51AP1Q96B01 352 aa15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 NUS1Q96E22 293 aa15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 PPP1R16AQ96I34 528 aa15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 CDCA4Q9BXL8 241 aa15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 CNOT2Q9NZN8 540 aaKnown RBP15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 TAAR2Q9P1P5 351 aa15.3■□□□□ 0.04
CHMP1A-202ENST00000535997 EFCAB10A6NFE3 127 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 TLL1O43897 1013 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 UPK1BO75841 260 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 ITGB8P26012 769 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 SOAT1P35610 550 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 FPGSQ05932 587 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 INAVAQ3KP66 663 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 TOR1AIP1Q5JTV8 583 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 LCTLQ6UWM7 567 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 SLC9B2Q86UD5 537 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 SLC22A16Q86VW1 577 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 FAM129CQ86XR2 697 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 TMIEQ8NEW7 156 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 GTPBP3Q969Y2 492 aaKnown RBP15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 ZDHHC5Q9C0B5 715 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 SP140LQ9H930 580 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 SPATA7Q9P0W8 599 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 KCND3Q9UK17 655 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 MKI67P46013 3256 aaKnown RBP15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 ZAR1LA6NP61 321 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 TIMP1P01033 207 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 PTHP01270 115 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 GASTP01350 101 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 ITGB7P26010 798 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 TPP2P29144 1249 aaPredicted RBP15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 CRISP1P54107 249 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 ZNF45Q02386 682 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 CDC20Q12834 499 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 GANABQ14697 944 aaKnown RBP15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 ZNF181Q2M3W8 571 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 PRAMEF14Q5SWL7 426 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 PRAMEF13Q5VWM6 474 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 CEACAM20Q6UY09 585 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 VN1R5Q7Z5H4 357 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 SLC44A2Q8IWA5 706 aaPredicted RBP15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 AQP11Q8NBQ7 271 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 CPNE5Q9HCH3 593 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 SLC27A6Q9Y2P4 619 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 IFT52Q9Y366 437 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 PCDHGA3Q9Y5H0 932 aa15.29■□□□□ 0.04
CHMP1A-202ENST00000535997 VEGFDO43915 354 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 ACRP10323 421 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 DDCP20711 480 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 NFE2L1Q14494 772 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 PUM1Q14671 1186 aaKnown RBP eCLIP15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 COLEC12Q5KU26 742 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms